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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
159 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180455613
OBXO01015300
200563
Bacillota
TGG
Pro
>WENV180455696
OBXO01026494
200563
Bacillota
TGG
Pro
>WENV180455466
OBXO01004711
289252
Bacillota
GTG
His
>WENV180455066
OBXO01000335
420421
Bacillota
TTC
Glu
>WENV180455623
OBXO01015395
420421
Bacillota
TTC
Glu
>WENV180455648
OBXO01019368
480520
Bacillota
TCC
Gly
>WENV180455728
OBXO01030681
480520
Bacillota
TCC
Gly
>WENV180455511
OBXO01006675
210788
Bacillota
GAT
Ile
>WENV180455373
OBXO01002201
218938
Bacillota
CAT
Met
>WENV180455380
OBXO01002225
20221
Bacillota
>WENV180454736
OBXO01000011
290391
Bacillota
TAC
Val
>WENV180454691
OBXO01000001
290391
Bacillota
TAC
Val
>WENV180455070
OBXO01000352
291579
Bacillota
GAA
Phe
>WENV180454908
OBXO01000125
291579
Bacillota
GAA
Phe
>WENV180454871
OBXO01000103
291579
Bacillota
GAA
Phe
>WENV180454907
OBXO01000125
179917
Bacillota
CAT
Met
>WENV180455707
OBXO01027265
176678
Bacillota
GTC
Asp
>WENV180455782
OBXO01047819
176678
Bacillota
GTC
Asp
>WENV180455743
OBXO01032358
281017
Bacillota
GAA
Phe
>WENV180455753
OBXO01034241
191457
Bacillota
GAT
Ile
>WENV180455321
OBXO01001327
418726
Bacillota
TGT
Thr
>WENV180455472
OBXO01005050
418726
Bacillota
TGT
Thr
>WENV180455366
OBXO01002153
287289
Bacillota
GCC
Gly
>WENV180455028
OBXO01000282
184497
Bacillota
GGG
Pro
>WENV180455555
OBXO01009400
314780
Bacillota
TGT
Thr
>WENV180455295
OBXO01001070
180049
Bacillota
GTC
Asp
>WENV180455626
OBXO01015395
180049
Bacillota
GTC
Asp
>WENV180455461
OBXO01004536
184086
Bacillota
GTT
Asn
>WENV180455248
OBXO01000736
22010
Bacillota
GCT
Ser
>WENV180455766
OBXO01036776
298270
Bacillota
TAC
Val
>WENV180455611
OBXO01015300
176018
Bacillota
CAT
Met
>WENV180455622
OBXO01015347
398915
Bacillota
TTC
Glu
>WENV180455165
OBXO01000459
74051
Bacillota
CAA
Leu
>WENV180455441
OBXO01003843
13228
Bacillota
GGA
Ser
>WENV180455653
OBXO01019368
141334
Bacillota
TAG
Leu
>WENV180455516
OBXO01007132
215243
Bacillota
CAT
Met
>WENV180455368
OBXO01002201
176014
Bacillota
TCT
Arg
>WENV180455739
OBXO01032225
176014
Bacillota
TCT
Arg
>WENV180455797
OBXO01048744
398916
Bacillota
>WENV180455798
OBXO01048761
398916
Bacillota
>WENV180455377
OBXO01002201
480360
Bacillota
GCA
Cys
>WENV180455699
OBXO01026494
480360
Bacillota
GCA
Cys
>WENV180455086
OBXO01000362
284723
Bacillota
TAC
Val
>WENV180454978
OBXO01000211
284723
Bacillota
TAC
Val
>WENV180455378
OBXO01002201
176087
Bacillota
ACG
Arg
>WENV180455652
OBXO01019368
283502
Bacillota
TTT
Lys
>WENV180455705
OBXO01027265
402717
Bacillota
TTC
Glu
>WENV180455727
OBXO01030681
402717
Bacillota
TTC
Glu
>WENV180455710
OBXO01027361
399266
Bacillota
>WENV180455630
OBXO01015755
280646
Bacillota
TGC
Ala
>WENV180455255
OBXO01000781
407726
Bacillota
CTG
Gln
>WENV180455256
OBXO01000781
407726
Bacillota
CTG
Gln
>WENV180455423
OBXO01003182
407726
Bacillota
CTG
Gln
>WENV180455479
OBXO01005554
398835
Bacillota
GCC
Gly
>WENV180455478
OBXO01005456
398835
Bacillota
GCC
Gly
>WENV180455447
OBXO01004131
398835
Bacillota
GCC
Gly
>WENV180455627
OBXO01015395
284502
Bacillota
TAC
Val
>WENV180455650
OBXO01019368
330433
Bacillota
GTG
His
>WENV180455471
OBXO01004940
284476
Bacillota
TGT
Thr
>WENV180455624
OBXO01015395
284476
Bacillota
TGT
Thr
>WENV180455796
OBXO01048725
284476
Bacillota
TGT
Thr
>WENV180455059
OBXO01000329
21311
Bacillota
GCT
Ser
>WENV180455587
OBXO01012602
324137
Bacillota
>WENV180454965
OBXO01000202
187589
Bacillota
CAT
Met
>WENV180455504
OBXO01006192
179130
Bacillota
ACG
Arg
>WENV180455665
OBXO01020557
195133
Bacillota
GTC
Asp
>WENV180455510
OBXO01006655
142210
Bacillota
>WENV180455790
OBXO01047966
124757
Bacillota
GTA
Tyr
>WENV180455693
OBXO01026097
147834
Bacillota
CAA
Leu
>WENV180455379
OBXO01002201
280640
Bacillota
TAC
Val
>WENV180455688
OBXO01024814
404091
Bacillota
TTG
Gln
>WENV180454979
OBXO01000211
187364
Bacillota
CAT
Met
>WENV180454809
OBXO01000052
401685
Bacillota
TTG
Gln
>WENV180454700
OBXO01000001
401685
Bacillota
TTG
Gln
>WENV180455687
OBXO01024814
289716
Bacillota
GTG
His
>WENV180455459
OBXO01004473
120584
Bacillota
GTA
Tyr
>WENV180455456
OBXO01004473
120584
Bacillota
GTA
Tyr
>WENV180455770
OBXO01038066
180688
Bacillota
GTC
Asp
>WENV180454847
OBXO01000077
73638
Bacillota
AAG
Leu
>WENV180455737
OBXO01031709
73638
Bacillota
AAG
Leu
>WENV180455278
OBXO01000908
178972
Bacillota
TCT
Arg
>WENV180455364
OBXO01002153
175911
Bacillota
GTC
Asp
>WENV180455082
OBXO01000356
175911
Bacillota
GTC
Asp
>WENV180455488
OBXO01005670
292374
Bacillota
TGC
Ala
>WENV180455292
OBXO01001045
484479
Bacillota
GCA
Cys
>WENV180455067
OBXO01000335
484479
Bacillota
GCA
Cys
>WENV180455375
OBXO01002201
176019
Bacillota
GTG
His
>WENV180455697
OBXO01026494
176019
Bacillota
GTG
His
>WENV180455539
OBXO01008484
398857
Bacillota
TTC
Glu
>WENV180454957
OBXO01000190
398857
Bacillota
TTC
Glu
>WENV180455002
OBXO01000234
204381
Bacillota
GAT
Ile
>WENV180454788
OBXO01000040
204381
Bacillota
GAT
Ile
>WENV180454786
OBXO01000040
204381
Bacillota
GAT
Ile
>WENV180455338
OBXO01001527
399249
Bacillota
CCT
Arg
>WENV180455690
OBXO01024966
291597
Bacillota
TGC
Ala
>WENV180455293
OBXO01001070
81226
Bacillota
TAA
Leu
>WENV180455074
OBXO01000355
180046
Bacillota
TCT
Arg
>WENV180455294
OBXO01001070
180046
Bacillota
TCT
Arg
>WENV180455390
OBXO01002633
180046
Bacillota
TCT
Arg
>WENV180455465
OBXO01004711
482411
Bacillota
CCA
Trp
>WENV180455542
OBXO01008631
303993
Bacillota
TTT
Lys
>WENV180455468
OBXO01004711
73616
Bacillota
CAA
Leu
>WENV180455189
OBXO01000528
47846
Bacillota
AAG
Leu
>WENV180454980
OBXO01000213
47846
Bacillota
AAG
Leu
>WENV180455777
OBXO01044821
280547
Bacillota
GTC
Asp
>WENV180455663
OBXO01020557
486506
Bacillota
TCC
Gly
>WENV180455682
OBXO01024595
486506
Bacillota
TCC
Gly
>WENV180455156
OBXO01000453
58120
Bacillota
AAG
Leu
>WENV180454873
OBXO01000103
58120
Bacillota
AAG
Leu
>WENV180454728
OBXO01000008
198522
Bacillota
GAT
Ile
>WENV180454727
OBXO01000008
198522
Bacillota
GAT
Ile
>WENV180455073
OBXO01000355
482098
Bacillota
>WENV180455281
OBXO01000931
482098
Bacillota
>WENV180455389
OBXO01002633
482098
Bacillota
>WENV180455484
OBXO01005608
482098
Bacillota
>WENV180455195
OBXO01000534
46835
Bacillota
TAA
Leu
>WENV180455077
OBXO01000355
319040
Bacillota
GCC
Gly
>WENV180455122
OBXO01000415
319040
Bacillota
GCC
Gly
>WENV180455395
OBXO01002680
319040
Bacillota
GCC
Gly
>WENV180455409
OBXO01002888
319040
Bacillota
GCC
Gly
>WENV180455604
OBXO01014500
319040
Bacillota
GCC
Gly
>WENV180455224
OBXO01000583
330413
Bacillota
CTT
Lys
>WENV180455649
OBXO01019368
203851
Bacillota
TCT
Arg
>WENV180455299
OBXO01001087
175915
Bacillota
GTC
Asp
>WENV180455194
OBXO01000534
175915
Bacillota
GTC
Asp
>WENV180454961
OBXO01000202
175915
Bacillota
GTC
Asp
>WENV180455142
OBXO01000439
320075
Bacillota
GAA
Phe
>WENV180454701
OBXO01000001
280476
Bacillota
TTT
Lys
>WENV180454735
OBXO01000011
280476
Bacillota
TTT
Lys
>WENV180454967
OBXO01000202
280476
Bacillota
TTT
Lys
>WENV180455055
OBXO01000328
280476
Bacillota
TTT
Lys
>WENV180455071
OBXO01000352
280476
Bacillota
TTT
Lys
>WENV180455201
OBXO01000534
280476
Bacillota
TTT
Lys
>WENV180455501
OBXO01006192
121632
Bacillota
TAG
Leu
>WENV180454810
OBXO01000052
309916
Bacillota
TTT
Lys
>WENV180455487
OBXO01005670
201856
Bacillota
GAT
Ile
>WENV180455661
OBXO01020557
281196
Bacillota
CAT
Met
>WENV180455721
OBXO01028606
281196
Bacillota
CAT
Met
>WENV180454739
OBXO01000013
321248
Bacillota
TAC
Val
>WENV180455304
OBXO01001139
321248
Bacillota
TAC
Val
>WENV180455570
OBXO01010839
321248
Bacillota
TAC
Val
>WENV180455701
OBXO01026831
321248
Bacillota
TAC
Val
>WENV180455569
OBXO01010772
284869
Bacillota
CCA
Trp
>WENV180455178
OBXO01000494
285601
Bacillota
TTC
Glu
>WENV180454955
OBXO01000189
285601
Bacillota
TTC
Glu
>WENV180454859
OBXO01000088
285601
Bacillota
TTC
Glu
>WENV180454822
OBXO01000059
285601
Bacillota
TTC
Glu
>WENV180454808
OBXO01000052
175857
Bacillota
GTG
His
>WENV180454702
OBXO01000002
285556
Bacillota
TGT
Thr
>WENV180454688
OBXO01000001
285556
Bacillota
TGT
Thr
>WENV180455713
OBXO01027580
317820
Bacillota
TAC
Val
>WENV180455133
OBXO01000430
317820
Bacillota
TAC
Val
>WENV180454879
OBXO01000111
317820
Bacillota
TAC
Val
>WENV180455006
OBXO01000234
317820
Bacillota
TAC
Val
>WENV180455640
OBXO01017533
318172
Bacillota
CCA
Trp
>WENV180455608
OBXO01015026
328987
Bacillota
TGG
Pro
>WENV180455198
OBXO01000534
179166
Bacillota
TCT
Arg
>WENV180455052
OBXO01000328
179166
Bacillota
TCT
Arg
>WENV180455794
OBXO01048644
280486
Bacillota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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