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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180711557
ODFP01001100
280978
Actinomycetota
CGT
Thr
>WENV180711600
ODFP01010133
118279
Actinomycetota
GTA
Tyr
>WENV180711549
ODFP01000575
180097
Actinomycetota
CAA
Leu
>WENV180711518
ODFP01000041
46667
Actinomycetota
GGA
Ser
>WENV180711540
ODFP01000139
176560
Actinomycetota
CAT
Met
>WENV180711575
ODFP01003732
284287
Actinomycetota
GAA
Phe
>WENV180711523
ODFP01000066
281035
Actinomycetota
GTT
Asn
>WENV180711573
ODFP01003732
280944
Actinomycetota
TTC
Glu
>WENV180711578
ODFP01004150
289322
Actinomycetota
GGT
Thr
>WENV180711590
ODFP01006170
336201
Actinomycetota
TGT
Thr
>WENV180711574
ODFP01003732
202982
Actinomycetota
GTC
Asp
>WENV180711595
ODFP01008465
287493
Actinomycetota
>WENV180711548
ODFP01000558
180096
Actinomycetota
GAT
Ile
>WENV180711576
ODFP01003759
284895
Actinomycetota
TCT
Arg
>WENV180711561
ODFP01001755
117851
Actinomycetota
GTA
Tyr
>WENV180711608
ODFP01012361
342697
Actinomycetota
TGC
Ala
>WENV180711594
ODFP01008465
403867
Actinomycetota
CTG
Gln
>WENV180711603
ODFP01010620
400674
Actinomycetota
CTG
Gln
>WENV180711599
ODFP01010044
187433
Actinomycetota
CCG
Arg
>WENV180711555
ODFP01000869
280982
Actinomycetota
CTT
Lys
>WENV180711521
ODFP01000058
312253
Actinomycetota
TGC
Ala
>WENV180711615
ODFP01018020
312253
Actinomycetota
TGC
Ala
>WENV180711563
ODFP01001964
46893
Actinomycetota
GAG
Leu
>WENV180711551
ODFP01000627
399188
Actinomycetota
CAT
Met
>WENV180711567
ODFP01002575
406233
Actinomycetota
CAC
Val
>WENV180711569
ODFP01002763
481452
Actinomycetota
CCC
Gly
>WENV180711583
ODFP01005292
214183
Actinomycetota
CGG
Pro
>WENV180711581
ODFP01004336
284288
Actinomycetota
TAC
Val
>WENV180711524
ODFP01000102
284289
Actinomycetota
CCT
Arg
>WENV180711553
ODFP01000651
47028
Actinomycetota
GGA
Ser
>WENV180711556
ODFP01001022
56546
Actinomycetota
CAG
Leu
>WENV180711609
ODFP01012977
24826
Actinomycetota
CGA
Ser
>WENV180711572
ODFP01003697
120845
Actinomycetota
TAG
Leu
>WENV180711542
ODFP01000256
197533
Actinomycetota
CAT
Met
>WENV180711554
ODFP01000722
289318
Actinomycetota
GTG
His
>WENV180711550
ODFP01000627
280979
Actinomycetota
GGT
Thr
>WENV180711546
ODFP01000431
421837
Actinomycetota
TCC
Gly
>WENV180711596
ODFP01008773
406385
Actinomycetota
CAC
Val
>WENV180711598
ODFP01009707
180067
Actinomycetota
TAA
Leu
>WENV180711571
ODFP01003188
284899
Actinomycetota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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