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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
58 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180722370
ODGM01000179
118433
Bacteroidota
TAG
Leu
>WENV180722242
ODGM01000023
400161
Bacteroidota
GGT
Thr
>WENV180722440
ODGM01000618
400161
Bacteroidota
GGT
Thr
>WENV180722756
ODGM01018075
179467
Bacteroidota
TGT
Thr
>WENV180722595
ODGM01003486
211453
Bacteroidota
TCT
Arg
>WENV180722999
ODGM01109598
192166
Bacteroidota
GTT
Asn
>WENV180722604
ODGM01003925
481329
Bacteroidota
>WENV180722418
ODGM01000386
400949
Bacteroidota
CCT
Arg
>WENV180722907
ODGM01054139
222068
Bacteroidota
GAT
Ile
>WENV180722581
ODGM01003209
179464
Bacteroidota
CAT
Met
>WENV180722519
ODGM01001647
178571
Bacteroidota
GTT
Asn
>WENV180723030
ODGM01129517
157895
Bacteroidota
TAC
Val
>WENV180722393
ODGM01000221
157895
Bacteroidota
TAC
Val
>WENV180722969
ODGM01091081
178572
Bacteroidota
CAT
Met
>WENV180722411
ODGM01000320
178572
Bacteroidota
CAT
Met
>WENV180722491
ODGM01001145
56385
Bacteroidota
TGA
Ser
>WENV180722441
ODGM01000618
312035
Bacteroidota
CCA
Trp
>WENV180722494
ODGM01001174
242241
Bacteroidota
GTC
Asp
>WENV180722443
ODGM01000638
404663
Bacteroidota
GGT
Thr
>WENV180722522
ODGM01001735
400850
Bacteroidota
TTC
Glu
>WENV180722758
ODGM01018075
317815
Bacteroidota
TCC
Gly
>WENV180722583
ODGM01003235
292874
Bacteroidota
GAA
Phe
>WENV180722254
ODGM01000031
175886
Bacteroidota
GGC
Ala
>WENV180722436
ODGM01000602
283315
Bacteroidota
CGT
Thr
>WENV180722594
ODGM01003486
168732
Bacteroidota
TGG
Pro
>WENV180722388
ODGM01000203
20533
Bacteroidota
GGA
Ser
>WENV180722871
ODGM01038900
179468
Bacteroidota
GTC
Asp
>WENV180722834
ODGM01028451
404109
Bacteroidota
CTC
Glu
>WENV180722389
ODGM01000205
156383
Bacteroidota
GGG
Pro
>WENV180722908
ODGM01054139
179822
Bacteroidota
TGC
Ala
>WENV180722419
ODGM01000386
46648
Bacteroidota
TAA
Leu
>WENV180722444
ODGM01000638
347386
Bacteroidota
CCA
Trp
>WENV180722655
ODGM01006359
179471
Bacteroidota
CAT
Met
>WENV180722874
ODGM01041385
118432
Bacteroidota
CAG
Leu
>WENV180722262
ODGM01000038
280478
Bacteroidota
GCC
Gly
>WENV180722506
ODGM01001479
481284
Bacteroidota
CCA
Trp
>WENV180722235
ODGM01000020
187400
Bacteroidota
GTT
Asn
>WENV180722234
ODGM01000020
187400
Bacteroidota
GTT
Asn
>WENV180722256
ODGM01000033
228511
Bacteroidota
GAT
Ile
>WENV180722255
ODGM01000033
21008
Bacteroidota
GGA
Ser
>WENV180722660
ODGM01007358
284457
Bacteroidota
CAT
Met
>WENV180722501
ODGM01001375
331443
Bacteroidota
CGT
Thr
>WENV180722439
ODGM01000618
118220
Bacteroidota
GTA
Tyr
>WENV180722448
ODGM01000694
118220
Bacteroidota
GTA
Tyr
>WENV180722598
ODGM01003710
284313
Bacteroidota
TTT
Lys
>WENV180722600
ODGM01003710
284313
Bacteroidota
TTT
Lys
>WENV180722718
ODGM01013420
119316
Bacteroidota
TAG
Leu
>WENV180722433
ODGM01000593
179653
Bacteroidota
GTG
His
>WENV180722392
ODGM01000217
481328
Bacteroidota
TTG
Gln
>WENV180722268
ODGM01000047
285750
Bacteroidota
CCC
Gly
>WENV180722316
ODGM01000083
284456
Bacteroidota
CGG
Pro
>WENV180722875
ODGM01041385
73509
Bacteroidota
GAG
Leu
>WENV180722248
ODGM01000026
73509
Bacteroidota
GAG
Leu
>WENV180722572
ODGM01002985
185161
Bacteroidota
GTT
Asn
>WENV180722512
ODGM01001557
157442
Bacteroidota
TAC
Val
>WENV180722932
ODGM01068658
75391
Bacteroidota
GAG
Leu
>WENV180722511
ODGM01001557
156405
Bacteroidota
TAC
Val
>WENV180722437
ODGM01000602
481045
Bacteroidota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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