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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
111 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180725415
ODGR01086240
288834
Bacillota
TAC
Val
>WENV180725086
ODGR01010052
283303
Bacillota
GTC
Asp
>WENV180725234
ODGR01022226
280500
Bacillota
TGC
Ala
>WENV180725262
ODGR01026412
289121
Bacillota
CCA
Trp
>WENV180725052
ODGR01008628
184537
Bacillota
ACG
Arg
>WENV180724278
ODGR01000345
221826
Bacillota
ACG
Arg
>WENV180725412
ODGR01086074
408526
Bacillota
GCA
Cys
>WENV180725298
ODGR01035717
296855
Bacillota
GGT
Thr
>WENV180725261
ODGR01026412
287508
Bacillota
GTG
His
>WENV180725254
ODGR01025090
48505
Bacillota
TGA
Ser
>WENV180724978
ODGR01006605
48505
Bacillota
TGA
Ser
>WENV180724318
ODGR01000424
183994
Bacillota
TCT
Arg
>WENV180725110
ODGR01010652
231532
Bacillota
ACG
Arg
>WENV180725239
ODGR01023472
459011
Bacillota
TGT
Thr
>WENV180724725
ODGR01002255
405874
Bacillota
TTC
Glu
>WENV180724617
ODGR01001629
405874
Bacillota
TTC
Glu
>WENV180725431
ODGR01090248
20932
Bacillota
GCT
Ser
>WENV180725350
ODGR01053957
291553
Bacillota
GAA
Phe
>WENV180725137
ODGR01012259
291553
Bacillota
GAA
Phe
>WENV180724800
ODGR01002842
291553
Bacillota
GAA
Phe
>WENV180724288
ODGR01000353
291553
Bacillota
GAA
Phe
>WENV180724818
ODGR01002996
482593
Bacillota
CCC
Gly
>WENV180724706
ODGR01002154
176014
Bacillota
TCT
Arg
>WENV180725433
ODGR01094282
339995
Bacillota
TGC
Ala
>WENV180725416
ODGR01086910
339995
Bacillota
TGC
Ala
>WENV180725376
ODGR01067281
339995
Bacillota
TGC
Ala
>WENV180725332
ODGR01045130
339995
Bacillota
TGC
Ala
>WENV180725302
ODGR01036201
339995
Bacillota
TGC
Ala
>WENV180725275
ODGR01031477
339995
Bacillota
TGC
Ala
>WENV180724796
ODGR01002824
20942
Bacillota
GGA
Ser
>WENV180724637
ODGR01001763
20942
Bacillota
GGA
Ser
>WENV180725019
ODGR01007775
100696
Bacillota
GTA
Tyr
>WENV180725096
ODGR01010311
287643
Bacillota
TAC
Val
>WENV180724726
ODGR01002255
287643
Bacillota
TAC
Val
>WENV180724618
ODGR01001629
287643
Bacillota
TAC
Val
>WENV180724925
ODGR01005284
452735
Bacillota
GCC
Gly
>WENV180724613
ODGR01001629
452735
Bacillota
GCC
Gly
>WENV180724986
ODGR01006862
187458
Bacillota
CAT
Met
>WENV180725098
ODGR01010311
338033
Bacillota
GAA
Phe
>WENV180724597
ODGR01001534
453914
Bacillota
GTT
Asn
>WENV180724332
ODGR01000459
183993
Bacillota
CAT
Met
>WENV180724984
ODGR01006862
356355
Bacillota
CAT
Met
>WENV180724331
ODGR01000459
289149
Bacillota
GGT
Thr
>WENV180725299
ODGR01035717
184495
Bacillota
CAT
Met
>WENV180724950
ODGR01005738
141202
Bacillota
CAA
Leu
>WENV180724625
ODGR01001705
141202
Bacillota
CAA
Leu
>WENV180725331
ODGR01044734
510876
Bacillota
GGT
Thr
>WENV180725079
ODGR01009842
402739
Bacillota
CCG
Arg
>WENV180724614
ODGR01001629
289147
Bacillota
GTT
Asn
>WENV180724704
ODGR01002154
195133
Bacillota
GTC
Asp
>WENV180725394
ODGR01073528
183957
Bacillota
CCT
Arg
>WENV180724888
ODGR01004283
293309
Bacillota
GTT
Asn
>WENV180724578
ODGR01001396
293309
Bacillota
GTT
Asn
>WENV180725295
ODGR01035717
289713
Bacillota
TGT
Thr
>WENV180725046
ODGR01008461
404091
Bacillota
TTG
Gln
>WENV180725102
ODGR01010311
110240
Bacillota
GAG
Leu
>WENV180724277
ODGR01000342
187364
Bacillota
CAT
Met
>WENV180725045
ODGR01008461
289716
Bacillota
GTG
His
>WENV180725095
ODGR01010311
287380
Bacillota
CTT
Lys
>WENV180725040
ODGR01008293
287380
Bacillota
CTT
Lys
>WENV180724338
ODGR01000486
323864
Bacillota
TGC
Ala
>WENV180725423
ODGR01088551
432453
Bacillota
TTC
Glu
>WENV180725355
ODGR01055909
432453
Bacillota
TTC
Glu
>WENV180724582
ODGR01001408
432453
Bacillota
TTC
Glu
>WENV180725329
ODGR01044503
480337
Bacillota
TCC
Gly
>WENV180725389
ODGR01072373
301649
Bacillota
TTT
Lys
>WENV180725361
ODGR01058850
301649
Bacillota
TTT
Lys
>WENV180725097
ODGR01010311
179935
Bacillota
GTC
Asp
>WENV180724386
ODGR01000662
398857
Bacillota
TTC
Glu
>WENV180724659
ODGR01001860
119459
Bacillota
TAG
Leu
>WENV180725429
ODGR01090041
333281
Bacillota
GTT
Asn
>WENV180724724
ODGR01002255
333281
Bacillota
GTT
Asn
>WENV180725349
ODGR01053957
280547
Bacillota
GTC
Asp
>WENV180725136
ODGR01012259
280547
Bacillota
GTC
Asp
>WENV180724799
ODGR01002842
280547
Bacillota
GTC
Asp
>WENV180724287
ODGR01000353
280547
Bacillota
GTC
Asp
>WENV180725440
ODGR01095988
445407
Bacillota
GCC
Gly
>WENV180725439
ODGR01095868
445407
Bacillota
GCC
Gly
>WENV180725430
ODGR01090042
445407
Bacillota
GCC
Gly
>WENV180724801
ODGR01002842
445407
Bacillota
GCC
Gly
>WENV180724577
ODGR01001396
445407
Bacillota
GCC
Gly
>WENV180724708
ODGR01002154
289154
Bacillota
CTT
Lys
>WENV180724384
ODGR01000657
289154
Bacillota
CTT
Lys
>WENV180725354
ODGR01055909
289761
Bacillota
TTT
Lys
>WENV180724579
ODGR01001396
289761
Bacillota
TTT
Lys
>WENV180725287
ODGR01034608
403759
Bacillota
CTC
Glu
>WENV180724254
ODGR01000286
235661
Bacillota
GTC
Asp
>WENV180724242
ODGR01000284
235661
Bacillota
GTC
Asp
>WENV180724963
ODGR01006258
283367
Bacillota
GCC
Gly
>WENV180724230
ODGR01000253
283367
Bacillota
GCC
Gly
>WENV180724797
ODGR01002827
52748
Bacillota
TGA
Ser
>WENV180724599
ODGR01001534
280561
Bacillota
CAT
Met
>WENV180725424
ODGR01088551
289715
Bacillota
TAC
Val
>WENV180725356
ODGR01055909
289715
Bacillota
TAC
Val
>WENV180724583
ODGR01001408
289715
Bacillota
TAC
Val
>WENV180724529
ODGR01001099
20943
Bacillota
CGA
Ser
>WENV180724938
ODGR01005576
20943
Bacillota
CGA
Ser
>WENV180725427
ODGR01089496
141141
Bacillota
GTA
Tyr
>WENV180724985
ODGR01006862
289123
Bacillota
GGT
Thr
>WENV180724245
ODGR01000284
444984
Bacillota
GCC
Gly
>WENV180723986
ODGR01000007
444984
Bacillota
GCC
Gly
>WENV180725328
ODGR01044503
208539
Bacillota
TGG
Pro
>WENV180724316
ODGR01000424
208539
Bacillota
TGG
Pro
>WENV180725330
ODGR01044503
184539
Bacillota
TCT
Arg
>WENV180724323
ODGR01000441
183995
Bacillota
GGG
Pro
>WENV180725103
ODGR01010311
100945
Bacillota
CAG
Leu
>WENV180724149
ODGR01000118
403766
Bacillota
TTG
Gln
>WENV180724926
ODGR01005284
489283
Bacillota
GCA
Cys
>WENV180725449
ODGR01096568
280486
Bacillota
TGC
Ala
>WENV180725092
ODGR01010311
289124
Bacillota
GTT
Asn
>WENV180725303
ODGR01036715
482078
Bacillota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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