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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
179 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180737510
ODHC01004621
99852
Bacillota
GTA
Tyr
>WENV180737588
ODHC01006161
99852
Bacillota
GTA
Tyr
>WENV180737852
ODHC01021575
99852
Bacillota
GTA
Tyr
>WENV180737389
ODHC01002789
343590
Bacillota
GCC
Gly
>WENV180737359
ODHC01002526
404076
Bacillota
GCC
Gly
>WENV180737409
ODHC01002935
404076
Bacillota
GCC
Gly
>WENV180737538
ODHC01005120
404076
Bacillota
GCC
Gly
>WENV180737744
ODHC01013505
280500
Bacillota
TGC
Ala
>WENV180737537
ODHC01005120
184504
Bacillota
GTC
Asp
>WENV180737606
ODHC01006956
184504
Bacillota
GTC
Asp
>WENV180737911
ODHC01027430
405363
Bacillota
GCA
Cys
>WENV180737833
ODHC01019625
405363
Bacillota
GCA
Cys
>WENV180738337
ODHC01162843
280428
Bacillota
GAA
Phe
>WENV180737625
ODHC01007738
280428
Bacillota
GAA
Phe
>WENV180737338
ODHC01002313
280428
Bacillota
GAA
Phe
>WENV180738070
ODHC01050839
291579
Bacillota
GAA
Phe
>WENV180736694
ODHC01000082
291579
Bacillota
GAA
Phe
>WENV180738290
ODHC01145267
280466
Bacillota
TAC
Val
>WENV180736905
ODHC01000418
280492
Bacillota
CTT
Lys
>WENV180736835
ODHC01000318
280492
Bacillota
CTT
Lys
>WENV180736771
ODHC01000204
280492
Bacillota
CTT
Lys
>WENV180737384
ODHC01002775
175842
Bacillota
CAC
Val
>WENV180737287
ODHC01001923
175842
Bacillota
CAC
Val
>WENV180737059
ODHC01000892
175842
Bacillota
CAC
Val
>WENV180738014
ODHC01038572
179563
Bacillota
GAT
Ile
>WENV180737920
ODHC01028450
101000
Bacillota
GTA
Tyr
>WENV180737796
ODHC01016014
215243
Bacillota
CAT
Met
>WENV180737295
ODHC01001959
404079
Bacillota
CAT
Met
>WENV180736933
ODHC01000493
190476
Bacillota
CAT
Met
>WENV180737912
ODHC01027498
184522
Bacillota
CCT
Arg
>WENV180738047
ODHC01044407
82124
Bacillota
TAA
Leu
>WENV180736764
ODHC01000171
82124
Bacillota
TAA
Leu
>WENV180738143
ODHC01074046
399153
Bacillota
TTC
Glu
>WENV180736834
ODHC01000316
73664
Bacillota
CAG
Leu
>WENV180737771
ODHC01014358
280447
Bacillota
GAC
Val
>WENV180737634
ODHC01007948
280447
Bacillota
GAC
Val
>WENV180737591
ODHC01006316
280447
Bacillota
GAC
Val
>WENV180737169
ODHC01001388
280447
Bacillota
GAC
Val
>WENV180736833
ODHC01000314
280447
Bacillota
GAC
Val
>WENV180737598
ODHC01006658
5692
Bacillota
GCT
Ser
>WENV180737152
ODHC01001301
5692
Bacillota
GCT
Ser
>WENV180737711
ODHC01011447
47207
Bacillota
TGA
Ser
>WENV180737943
ODHC01030912
203929
Bacillota
TCT
Arg
>WENV180738218
ODHC01107799
175825
Bacillota
GAT
Ile
>WENV180737450
ODHC01003557
284723
Bacillota
TAC
Val
>WENV180737936
ODHC01030209
73009
Bacillota
CAG
Leu
>WENV180737730
ODHC01012417
73009
Bacillota
CAG
Leu
>WENV180737587
ODHC01006161
73009
Bacillota
CAG
Leu
>WENV180737578
ODHC01005929
73009
Bacillota
CAG
Leu
>WENV180737472
ODHC01004023
73009
Bacillota
CAG
Leu
>WENV180737448
ODHC01003506
73009
Bacillota
CAG
Leu
>WENV180737254
ODHC01001773
73009
Bacillota
CAG
Leu
>WENV180737211
ODHC01001536
73009
Bacillota
CAG
Leu
>WENV180737869
ODHC01022911
481217
Bacillota
GCA
Cys
>WENV180737923
ODHC01028450
183993
Bacillota
CAT
Met
>WENV180737445
ODHC01003463
291581
Bacillota
CGG
Pro
>WENV180737242
ODHC01001725
291581
Bacillota
CGG
Pro
>WENV180737209
ODHC01001536
175859
Bacillota
TCT
Arg
>WENV180737835
ODHC01019664
398835
Bacillota
GCC
Gly
>WENV180738217
ODHC01107799
280436
Bacillota
TGC
Ala
>WENV180738045
ODHC01044407
175847
Bacillota
GTC
Asp
>WENV180737922
ODHC01028450
289149
Bacillota
GGT
Thr
>WENV180737900
ODHC01026245
175831
Bacillota
ACG
Arg
>WENV180737695
ODHC01010796
175831
Bacillota
ACG
Arg
>WENV180737403
ODHC01002913
175831
Bacillota
ACG
Arg
>WENV180738334
ODHC01162762
284627
Bacillota
GAA
Phe
>WENV180737266
ODHC01001791
284627
Bacillota
GAA
Phe
>WENV180737156
ODHC01001336
284627
Bacillota
GAA
Phe
>WENV180738177
ODHC01086190
289147
Bacillota
GTT
Asn
>WENV180737328
ODHC01002215
183957
Bacillota
CCT
Arg
>WENV180737898
ODHC01025704
295350
Bacillota
TGC
Ala
>WENV180737810
ODHC01017085
480322
Bacillota
CTG
Gln
>WENV180737692
ODHC01010707
480322
Bacillota
CTG
Gln
>WENV180737481
ODHC01004112
480322
Bacillota
CTG
Gln
>WENV180737444
ODHC01003463
480322
Bacillota
CTG
Gln
>WENV180737241
ODHC01001725
480322
Bacillota
CTG
Gln
>WENV180737108
ODHC01001113
480322
Bacillota
CTG
Gln
>WENV180736867
ODHC01000347
187364
Bacillota
CAT
Met
>WENV180737770
ODHC01014337
175868
Bacillota
GTT
Asn
>WENV180737741
ODHC01013255
175868
Bacillota
GTT
Asn
>WENV180737569
ODHC01005789
175868
Bacillota
GTT
Asn
>WENV180737375
ODHC01002644
175868
Bacillota
GTT
Asn
>WENV180737300
ODHC01002019
175868
Bacillota
GTT
Asn
>WENV180737164
ODHC01001362
175868
Bacillota
GTT
Asn
>WENV180737083
ODHC01000989
175868
Bacillota
GTT
Asn
>WENV180738286
ODHC01143710
200900
Bacillota
TGG
Pro
>WENV180738322
ODHC01162605
322848
Bacillota
CTT
Lys
>WENV180738175
ODHC01084947
322848
Bacillota
CTT
Lys
>WENV180738007
ODHC01037342
322848
Bacillota
CTT
Lys
>WENV180737683
ODHC01009940
322848
Bacillota
CTT
Lys
>WENV180737580
ODHC01005961
322848
Bacillota
CTT
Lys
>WENV180738228
ODHC01108858
398854
Bacillota
CTC
Glu
>WENV180738174
ODHC01084947
398854
Bacillota
CTC
Glu
>WENV180738006
ODHC01037342
398854
Bacillota
CTC
Glu
>WENV180737579
ODHC01005961
398854
Bacillota
CTC
Glu
>WENV180737299
ODHC01002019
398854
Bacillota
CTC
Glu
>WENV180737163
ODHC01001362
398854
Bacillota
CTC
Glu
>WENV180737082
ODHC01000989
398854
Bacillota
CTC
Glu
>WENV180737809
ODHC01017057
291576
Bacillota
CCC
Gly
>WENV180737739
ODHC01013080
291576
Bacillota
CCC
Gly
>WENV180737650
ODHC01008539
291576
Bacillota
CCC
Gly
>WENV180737142
ODHC01001236
291576
Bacillota
CCC
Gly
>WENV180737938
ODHC01030262
480324
Bacillota
TTG
Gln
>WENV180737642
ODHC01008177
480324
Bacillota
TTG
Gln
>WENV180737522
ODHC01004866
480324
Bacillota
TTG
Gln
>WENV180737161
ODHC01001346
480324
Bacillota
TTG
Gln
>WENV180738157
ODHC01077370
400963
Bacillota
GTT
Asn
>WENV180737236
ODHC01001674
497729
Bacillota
CCA
Trp
>WENV180738147
ODHC01075639
180688
Bacillota
GTC
Asp
>WENV180737960
ODHC01033268
175899
Bacillota
GTC
Asp
>WENV180737123
ODHC01001173
175899
Bacillota
GTC
Asp
>WENV180736811
ODHC01000292
56079
Bacillota
AAG
Leu
>WENV180737904
ODHC01026487
323864
Bacillota
TGC
Ala
>WENV180737837
ODHC01019854
323864
Bacillota
TGC
Ala
>WENV180737641
ODHC01008157
323864
Bacillota
TGC
Ala
>WENV180737890
ODHC01024677
175911
Bacillota
GTC
Asp
>WENV180737766
ODHC01014212
175911
Bacillota
GTC
Asp
>WENV180737177
ODHC01001418
46655
Bacillota
TGA
Ser
>WENV180737845
ODHC01020719
292374
Bacillota
TGC
Ala
>WENV180738176
ODHC01086190
404126
Bacillota
GCC
Gly
>WENV180737958
ODHC01033075
398857
Bacillota
TTC
Glu
>WENV180737138
ODHC01001228
398857
Bacillota
TTC
Glu
>WENV180737963
ODHC01033268
117745
Bacillota
GTA
Tyr
>WENV180736636
ODHC01000059
117745
Bacillota
GTA
Tyr
>WENV180737258
ODHC01001780
280444
Bacillota
GGT
Thr
>WENV180737617
ODHC01007437
280444
Bacillota
GGT
Thr
>WENV180737616
ODHC01007437
280444
Bacillota
GGT
Thr
>WENV180737575
ODHC01005828
280444
Bacillota
GGT
Thr
>WENV180737574
ODHC01005828
280444
Bacillota
GGT
Thr
>WENV180737137
ODHC01001217
483485
Bacillota
CCC
Gly
>WENV180738059
ODHC01046505
46643
Bacillota
TGA
Ser
>WENV180737196
ODHC01001483
46643
Bacillota
TGA
Ser
>WENV180738040
ODHC01042299
100999
Bacillota
GAG
Leu
>WENV180738154
ODHC01076371
15649
Bacillota
GGA
Ser
>WENV180737859
ODHC01021965
179755
Bacillota
CCG
Arg
>WENV180737512
ODHC01004657
179755
Bacillota
CCG
Arg
>WENV180737449
ODHC01003527
179755
Bacillota
CCG
Arg
>WENV180738039
ODHC01042299
280547
Bacillota
GTC
Asp
>WENV180738088
ODHC01055262
127792
Bacillota
TAG
Leu
>WENV180737878
ODHC01023944
289154
Bacillota
CTT
Lys
>WENV180736934
ODHC01000493
398832
Bacillota
TTC
Glu
>WENV180737264
ODHC01001791
118669
Bacillota
GTA
Tyr
>WENV180736763
ODHC01000171
118669
Bacillota
GTA
Tyr
>WENV180737658
ODHC01008988
175915
Bacillota
GTC
Asp
>WENV180737965
ODHC01033268
280462
Bacillota
GAA
Phe
>WENV180736718
ODHC01000110
280462
Bacillota
GAA
Phe
>WENV180737307
ODHC01002069
398852
Bacillota
CTC
Glu
>WENV180736559
ODHC01000014
398852
Bacillota
CTC
Glu
>WENV180736537
ODHC01000004
398852
Bacillota
CTC
Glu
>WENV180738247
ODHC01115435
201856
Bacillota
GAT
Ile
>WENV180738096
ODHC01056795
201856
Bacillota
GAT
Ile
>WENV180738032
ODHC01041505
280483
Bacillota
GAA
Phe
>WENV180737789
ODHC01015594
183995
Bacillota
GGG
Pro
>WENV180736823
ODHC01000299
406186
Bacillota
CTC
Glu
>WENV180736822
ODHC01000299
406186
Bacillota
CTC
Glu
>WENV180736821
ODHC01000299
406186
Bacillota
CTC
Glu
>WENV180738125
ODHC01067815
175857
Bacillota
GTG
His
>WENV180737534
ODHC01005091
175857
Bacillota
GTG
His
>WENV180737844
ODHC01020669
184523
Bacillota
GAC
Val
>WENV180738178
ODHC01087827
398833
Bacillota
TGT
Thr
>WENV180737551
ODHC01005554
398833
Bacillota
TGT
Thr
>WENV180737516
ODHC01004758
398833
Bacillota
TGT
Thr
>WENV180737509
ODHC01004621
398833
Bacillota
TGT
Thr
>WENV180738333
ODHC01162754
175849
Bacillota
GTC
Asp
>WENV180738256
ODHC01121620
175849
Bacillota
GTC
Asp
>WENV180738212
ODHC01105203
175849
Bacillota
GTC
Asp
>WENV180738138
ODHC01073292
175849
Bacillota
GTC
Asp
>WENV180737615
ODHC01007437
175849
Bacillota
GTC
Asp
>WENV180737573
ODHC01005828
175849
Bacillota
GTC
Asp
>WENV180737257
ODHC01001780
175849
Bacillota
GTC
Asp
>WENV180738242
ODHC01113513
179166
Bacillota
TCT
Arg
>WENV180737782
ODHC01015227
280486
Bacillota
TGC
Ala
>WENV180737769
ODHC01014264
280486
Bacillota
TGC
Ala
>WENV180737715
ODHC01011910
280486
Bacillota
TGC
Ala
>WENV180737597
ODHC01006658
56074
Bacillota
TGA
Ser
>WENV180737151
ODHC01001301
56074
Bacillota
TGA
Ser
>WENV180737225
ODHC01001629
482078
Bacillota
CCC
Gly
>WENV180737412
ODHC01002937
280473
Bacillota
TGG
Pro
>WENV180737298
ODHC01002014
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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