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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180838898
ODKH01000100
283336
Actinomycetota
GGT
Thr
>WENV180838944
ODKH01001548
280978
Actinomycetota
CGT
Thr
>WENV180838919
ODKH01000331
178802
Actinomycetota
TAA
Leu
>WENV180838897
ODKH01000100
118279
Actinomycetota
GTA
Tyr
>WENV180838967
ODKH01004935
180084
Actinomycetota
CAT
Met
>WENV180838902
ODKH01000134
178581
Actinomycetota
TAC
Val
>WENV180838956
ODKH01002490
176560
Actinomycetota
CAT
Met
>WENV180838907
ODKH01000193
400421
Actinomycetota
GAC
Val
>WENV180838952
ODKH01002100
100162
Actinomycetota
TGA
Ser
>WENV180838950
ODKH01001959
281035
Actinomycetota
GTT
Asn
>WENV180838973
ODKH01007198
280944
Actinomycetota
TTC
Glu
>WENV180838974
ODKH01007235
281043
Actinomycetota
TTT
Lys
>WENV180838914
ODKH01000241
150281
Actinomycetota
TTG
Gln
>WENV180838899
ODKH01000100
399203
Actinomycetota
CAT
Met
>WENV180838886
ODKH01000065
283323
Actinomycetota
TGT
Thr
>WENV180838929
ODKH01000559
280989
Actinomycetota
TGC
Ala
>WENV180838933
ODKH01000720
280989
Actinomycetota
TGC
Ala
>WENV180838977
ODKH01007555
287493
Actinomycetota
>WENV180838932
ODKH01000720
180096
Actinomycetota
GAT
Ile
>WENV180838891
ODKH01000080
178580
Actinomycetota
GAA
Phe
>WENV180838986
ODKH01010714
117851
Actinomycetota
GTA
Tyr
>WENV180838930
ODKH01000657
176353
Actinomycetota
CAA
Leu
>WENV180838976
ODKH01007555
403867
Actinomycetota
CTG
Gln
>WENV180838970
ODKH01005705
403867
Actinomycetota
CTG
Gln
>WENV180838996
ODKH01013582
187433
Actinomycetota
CCG
Arg
>WENV180838945
ODKH01001764
402794
Actinomycetota
TCC
Gly
>WENV180838958
ODKH01003224
280982
Actinomycetota
CTT
Lys
>WENV180838893
ODKH01000087
46790
Actinomycetota
GAG
Leu
>WENV180838890
ODKH01000080
178579
Actinomycetota
GTC
Asp
>WENV180838879
ODKH01000040
283329
Actinomycetota
GTG
His
>WENV180838921
ODKH01000354
283327
Actinomycetota
TGC
Ala
>WENV180838895
ODKH01000099
283335
Actinomycetota
CTT
Lys
>WENV180838948
ODKH01001862
399188
Actinomycetota
CAT
Met
>WENV180838969
ODKH01005634
406233
Actinomycetota
CAC
Val
>WENV180838937
ODKH01001140
284288
Actinomycetota
TAC
Val
>WENV180838918
ODKH01000327
100161
Actinomycetota
CAG
Leu
>WENV180838935
ODKH01000974
47028
Actinomycetota
GGA
Ser
>WENV180838924
ODKH01000487
56387
Actinomycetota
CGA
Ser
>WENV180838947
ODKH01001862
280979
Actinomycetota
GGT
Thr
>WENV180838992
ODKH01012851
180067
Actinomycetota
TAA
Leu
>WENV180838888
ODKH01000080
178582
Actinomycetota
TTT
Lys
>WENV180838922
ODKH01000405
400420
Actinomycetota
CTG
Gln
>WENV180838903
ODKH01000170
283322
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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