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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180920338
ODTH01003816
184065
Actinomycetota
TGG
Pro
>WENV180920382
ODTH01004658
184065
Actinomycetota
TGG
Pro
>WENV180920537
ODTH01008802
184065
Actinomycetota
TGG
Pro
>WENV180920612
ODTH01011421
184065
Actinomycetota
TGG
Pro
>WENV180920189
ODTH01001979
194706
Actinomycetota
CAT
Met
>WENV180921037
ODTH01079742
284890
Actinomycetota
CTT
Lys
>WENV180919946
ODTH01000613
284889
Actinomycetota
CTC
Glu
>WENV180920020
ODTH01000956
184493
Actinomycetota
GGG
Pro
>WENV180920360
ODTH01004446
184493
Actinomycetota
GGG
Pro
>WENV180920440
ODTH01006088
184493
Actinomycetota
GGG
Pro
>WENV180920474
ODTH01006460
184493
Actinomycetota
GGG
Pro
>WENV180921072
ODTH01100061
443526
Actinomycetota
CAC
Val
>WENV180920326
ODTH01003710
285880
Actinomycetota
TCT
Arg
>WENV180920276
ODTH01003009
292656
Actinomycetota
ACG
Arg
>WENV180919966
ODTH01000650
507958
Actinomycetota
CCC
Gly
>WENV180920430
ODTH01005782
287251
Actinomycetota
CTT
Lys
>WENV180919894
ODTH01000393
180071
Actinomycetota
CAT
Met
>WENV180920299
ODTH01003196
221845
Actinomycetota
GAT
Ile
>WENV180920337
ODTH01003816
481756
Actinomycetota
TCC
Gly
>WENV180920404
ODTH01005079
285877
Actinomycetota
CCG
Arg
>WENV180921083
ODTH01111254
466038
Actinomycetota
GAC
Val
>WENV180920420
ODTH01005634
284887
Actinomycetota
GCC
Gly
>WENV180919944
ODTH01000613
284887
Actinomycetota
GCC
Gly
>WENV180920392
ODTH01004886
292678
Actinomycetota
CTT
Lys
>WENV180920393
ODTH01004886
292678
Actinomycetota
CTT
Lys
>WENV180920584
ODTH01010476
297606
Actinomycetota
CCT
Arg
>WENV180920239
ODTH01002492
371116
Actinomycetota
GGC
Ala
>WENV180920820
ODTH01026418
371116
Actinomycetota
GGC
Ala
>WENV180920511
ODTH01007562
442299
Actinomycetota
CTG
Gln
>WENV180920690
ODTH01015273
482493
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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