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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
111 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180998352
ODVT01000227
289121
Bacillota
CCA
Trp
>WENV180999908
ODVT01101821
289121
Bacillota
CCA
Trp
>WENV180999213
ODVT01009243
281077
Bacillota
GTT
Asn
>WENV180999530
ODVT01027701
281077
Bacillota
GTT
Asn
>WENV180999546
ODVT01027948
184537
Bacillota
ACG
Arg
>WENV180999773
ODVT01063733
221826
Bacillota
ACG
Arg
>WENV180999624
ODVT01039516
408526
Bacillota
GCA
Cys
>WENV180999879
ODVT01094364
424998
Bacillota
GCC
Gly
>WENV180999227
ODVT01009404
296855
Bacillota
GGT
Thr
>WENV180998351
ODVT01000227
287508
Bacillota
GTG
His
>WENV180999519
ODVT01026360
48505
Bacillota
TGA
Ser
>WENV180999422
ODVT01018170
284746
Bacillota
CTG
Gln
>WENV180998705
ODVT01001433
284746
Bacillota
CTG
Gln
>WENV180999028
ODVT01004875
289717
Bacillota
CTT
Lys
>WENV180998917
ODVT01003254
20932
Bacillota
GCT
Ser
>WENV180999622
ODVT01039516
291553
Bacillota
GAA
Phe
>WENV180999092
ODVT01006139
291553
Bacillota
GAA
Phe
>WENV181000113
ODVT01234029
295166
Bacillota
TGC
Ala
>WENV180999980
ODVT01129105
295166
Bacillota
TGC
Ala
>WENV180999769
ODVT01062561
295166
Bacillota
TGC
Ala
>WENV180999466
ODVT01020990
295166
Bacillota
TGC
Ala
>WENV180998759
ODVT01001772
482593
Bacillota
CCC
Gly
>WENV180999815
ODVT01073708
339995
Bacillota
TGC
Ala
>WENV180998883
ODVT01002835
20942
Bacillota
GGA
Ser
>WENV181000126
ODVT01234629
409321
Bacillota
TTC
Glu
>WENV180998317
ODVT01000178
409321
Bacillota
TTC
Glu
>WENV180999984
ODVT01131355
100696
Bacillota
GTA
Tyr
>WENV180999938
ODVT01112335
100696
Bacillota
GTA
Tyr
>WENV180999767
ODVT01062558
100696
Bacillota
GTA
Tyr
>WENV180998184
ODVT01000058
100696
Bacillota
GTA
Tyr
>WENV180998731
ODVT01001658
100696
Bacillota
GTA
Tyr
>WENV180998945
ODVT01003807
100696
Bacillota
GTA
Tyr
>WENV180998999
ODVT01004390
100696
Bacillota
GTA
Tyr
>WENV180999508
ODVT01024888
100696
Bacillota
GTA
Tyr
>WENV180999935
ODVT01111018
287643
Bacillota
TAC
Val
>WENV181000157
ODVT01244051
187458
Bacillota
CAT
Met
>WENV180999897
ODVT01098287
187458
Bacillota
CAT
Met
>WENV180999768
ODVT01062558
187458
Bacillota
CAT
Met
>WENV180999553
ODVT01028880
187458
Bacillota
CAT
Met
>WENV180999509
ODVT01024888
187458
Bacillota
CAT
Met
>WENV180998946
ODVT01003807
187458
Bacillota
CAT
Met
>WENV180998732
ODVT01001658
187458
Bacillota
CAT
Met
>WENV180998185
ODVT01000058
187458
Bacillota
CAT
Met
>WENV180999853
ODVT01086293
338033
Bacillota
GAA
Phe
>WENV180999498
ODVT01023162
338033
Bacillota
GAA
Phe
>WENV180998319
ODVT01000178
338033
Bacillota
GAA
Phe
>WENV180999228
ODVT01009404
184495
Bacillota
CAT
Met
>WENV180999157
ODVT01007399
141202
Bacillota
CAA
Leu
>WENV180998353
ODVT01000227
402739
Bacillota
CCG
Arg
>WENV180998598
ODVT01000865
402739
Bacillota
CCG
Arg
>WENV180998706
ODVT01001444
402739
Bacillota
CCG
Arg
>WENV180999562
ODVT01030798
402739
Bacillota
CCG
Arg
>WENV180999141
ODVT01007153
183957
Bacillota
CCT
Arg
>WENV180999027
ODVT01004872
183957
Bacillota
CCT
Arg
>WENV180998804
ODVT01002153
183957
Bacillota
CCT
Arg
>WENV180999575
ODVT01033233
156730
Bacillota
ACG
Arg
>WENV180999046
ODVT01005043
156730
Bacillota
ACG
Arg
>WENV180998906
ODVT01003128
156730
Bacillota
ACG
Arg
>WENV180998730
ODVT01001647
156730
Bacillota
ACG
Arg
>WENV180999224
ODVT01009404
289713
Bacillota
TGT
Thr
>WENV180998751
ODVT01001742
404091
Bacillota
TTG
Gln
>WENV180998760
ODVT01001779
187364
Bacillota
CAT
Met
>WENV180998750
ODVT01001742
289716
Bacillota
GTG
His
>WENV180999934
ODVT01111018
287380
Bacillota
CTT
Lys
>WENV180999177
ODVT01007826
287380
Bacillota
CTT
Lys
>WENV180998781
ODVT01001943
287380
Bacillota
CTT
Lys
>WENV180998186
ODVT01000058
287380
Bacillota
CTT
Lys
>WENV180999534
ODVT01027701
292612
Bacillota
TAC
Val
>WENV180999407
ODVT01017611
292612
Bacillota
TAC
Val
>WENV181000134
ODVT01235586
432453
Bacillota
TTC
Glu
>WENV180999899
ODVT01099906
432453
Bacillota
TTC
Glu
>WENV180999844
ODVT01081529
480337
Bacillota
TCC
Gly
>WENV180998320
ODVT01000178
404126
Bacillota
GCC
Gly
>WENV180999369
ODVT01015589
404126
Bacillota
GCC
Gly
>WENV180999378
ODVT01016029
404126
Bacillota
GCC
Gly
>WENV180999583
ODVT01033912
404126
Bacillota
GCC
Gly
>WENV181000160
ODVT01244534
404126
Bacillota
GCC
Gly
>WENV181000118
ODVT01234531
404126
Bacillota
GCC
Gly
>WENV180999616
ODVT01038630
404126
Bacillota
GCC
Gly
>WENV180999377
ODVT01016029
179935
Bacillota
GTC
Asp
>WENV180999408
ODVT01017611
179935
Bacillota
GTC
Asp
>WENV181000097
ODVT01223102
179935
Bacillota
GTC
Asp
>WENV180999555
ODVT01029037
119459
Bacillota
TAG
Leu
>WENV181000153
ODVT01243725
333281
Bacillota
GTT
Asn
>WENV180999621
ODVT01039516
280547
Bacillota
GTC
Asp
>WENV180999550
ODVT01028226
280547
Bacillota
GTC
Asp
>WENV180999898
ODVT01099906
289761
Bacillota
TTT
Lys
>WENV180998752
ODVT01001742
289761
Bacillota
TTT
Lys
>WENV180998341
ODVT01000212
403759
Bacillota
CTC
Glu
>WENV180998342
ODVT01000212
403759
Bacillota
CTC
Glu
>WENV180999068
ODVT01005664
403759
Bacillota
CTC
Glu
>WENV181000169
ODVT01244843
403759
Bacillota
CTC
Glu
>WENV180999959
ODVT01119084
283367
Bacillota
GCC
Gly
>WENV180999878
ODVT01093580
283367
Bacillota
GCC
Gly
>WENV180999783
ODVT01066476
283367
Bacillota
GCC
Gly
>WENV180999712
ODVT01053715
283367
Bacillota
GCC
Gly
>WENV181000135
ODVT01235586
289715
Bacillota
TAC
Val
>WENV180999900
ODVT01099906
289715
Bacillota
TAC
Val
>WENV180998905
ODVT01003126
20943
Bacillota
CGA
Ser
>WENV180999940
ODVT01112335
289123
Bacillota
GGT
Thr
>WENV180999843
ODVT01081529
208539
Bacillota
TGG
Pro
>WENV180999845
ODVT01081529
184539
Bacillota
TCT
Arg
>WENV181000137
ODVT01236012
100945
Bacillota
CAG
Leu
>WENV180999413
ODVT01017611
100945
Bacillota
CAG
Leu
>WENV180998937
ODVT01003733
100945
Bacillota
CAG
Leu
>WENV180999927
ODVT01108714
280486
Bacillota
TGC
Ala
>WENV180999681
ODVT01047857
280486
Bacillota
TGC
Ala
>WENV181000013
ODVT01150072
289124
Bacillota
GTT
Asn
>WENV180999610
ODVT01036955
289124
Bacillota
GTT
Asn
>WENV180999154
ODVT01007330
289124
Bacillota
GTT
Asn
>WENV180999581
ODVT01033623
482078
Bacillota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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