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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
88 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181027198
ODXC01161757
99852
Bacillota
GTA
Tyr
>WENV181027156
ODXC01122283
356775
Bacillota
TGT
Thr
>WENV181026892
ODXC01022049
280500
Bacillota
TGC
Ala
>WENV181027018
ODXC01049019
280500
Bacillota
TGC
Ala
>WENV181026307
ODXC01000553
349107
Bacillota
GCC
Gly
>WENV181026424
ODXC01001271
349107
Bacillota
GCC
Gly
>WENV181026464
ODXC01001532
349107
Bacillota
GCC
Gly
>WENV181026784
ODXC01009898
349107
Bacillota
GCC
Gly
>WENV181026867
ODXC01019206
349107
Bacillota
GCC
Gly
>WENV181026785
ODXC01009898
405363
Bacillota
GCA
Cys
>WENV181026783
ODXC01009898
280428
Bacillota
GAA
Phe
>WENV181026721
ODXC01006878
289023
Bacillota
TGC
Ala
>WENV181026868
ODXC01019206
280466
Bacillota
TAC
Val
>WENV181026425
ODXC01001271
280466
Bacillota
TAC
Val
>WENV181026308
ODXC01000553
280466
Bacillota
TAC
Val
>WENV181026143
ODXC01000127
280492
Bacillota
CTT
Lys
>WENV181026031
ODXC01000023
280492
Bacillota
CTT
Lys
>WENV181027190
ODXC01156843
175842
Bacillota
CAC
Val
>WENV181027107
ODXC01086055
291629
Bacillota
CCA
Trp
>WENV181026683
ODXC01005482
236579
Bacillota
GAT
Ile
>WENV181027012
ODXC01048175
179176
Bacillota
ACG
Arg
>WENV181026682
ODXC01005482
295166
Bacillota
TGC
Ala
>WENV181026531
ODXC01002095
190476
Bacillota
CAT
Met
>WENV181026160
ODXC01000145
73664
Bacillota
CAG
Leu
>WENV181026608
ODXC01003430
280447
Bacillota
GAC
Val
>WENV181026281
ODXC01000437
280447
Bacillota
GAC
Val
>WENV181026779
ODXC01009616
5692
Bacillota
GCT
Ser
>WENV181026626
ODXC01003863
73009
Bacillota
CAG
Leu
>WENV181026491
ODXC01001644
73009
Bacillota
CAG
Leu
>WENV181026951
ODXC01030902
73009
Bacillota
CAG
Leu
>WENV181027110
ODXC01089680
189473
Bacillota
GAT
Ile
>WENV181026576
ODXC01002832
291581
Bacillota
CGG
Pro
>WENV181026489
ODXC01001644
175859
Bacillota
TCT
Arg
>WENV181026207
ODXC01000245
175847
Bacillota
GTC
Asp
>WENV181026798
ODXC01010654
290325
Bacillota
GCC
Gly
>WENV181026727
ODXC01007068
290325
Bacillota
GCC
Gly
>WENV181026953
ODXC01031131
175831
Bacillota
ACG
Arg
>WENV181027074
ODXC01071763
353153
Bacillota
TGC
Ala
>WENV181027014
ODXC01048688
284627
Bacillota
GAA
Phe
>WENV181026750
ODXC01008294
284627
Bacillota
GAA
Phe
>WENV181026237
ODXC01000298
284627
Bacillota
GAA
Phe
>WENV181026790
ODXC01010062
27216
Bacillota
GCT
Ser
>WENV181026645
ODXC01004424
480322
Bacillota
CTG
Gln
>WENV181026575
ODXC01002832
480322
Bacillota
CTG
Gln
>WENV181027200
ODXC01161787
175868
Bacillota
GTT
Asn
>WENV181027213
ODXC01163269
398854
Bacillota
CTC
Glu
>WENV181026901
ODXC01022912
291576
Bacillota
CCC
Gly
>WENV181026463
ODXC01001521
291576
Bacillota
CCC
Gly
>WENV181026691
ODXC01005785
480324
Bacillota
TTG
Gln
>WENV181027017
ODXC01048913
497729
Bacillota
CCA
Trp
>WENV181027121
ODXC01095419
175899
Bacillota
GTC
Asp
>WENV181026142
ODXC01000125
56079
Bacillota
AAG
Leu
>WENV181027150
ODXC01118296
398857
Bacillota
TTC
Glu
>WENV181026235
ODXC01000298
117745
Bacillota
GTA
Tyr
>WENV181026052
ODXC01000036
117745
Bacillota
GTA
Tyr
>WENV181027217
ODXC01163322
280444
Bacillota
GGT
Thr
>WENV181027161
ODXC01125008
317482
Bacillota
TAC
Val
>WENV181026363
ODXC01000819
46643
Bacillota
TGA
Ser
>WENV181026394
ODXC01000986
342104
Bacillota
TAC
Val
>WENV181026554
ODXC01002353
179755
Bacillota
CCG
Arg
>WENV181026241
ODXC01000304
179755
Bacillota
CCG
Arg
>WENV181026532
ODXC01002095
398832
Bacillota
TTC
Glu
>WENV181026492
ODXC01001666
118669
Bacillota
GTA
Tyr
>WENV181026776
ODXC01009577
175915
Bacillota
GTC
Asp
>WENV181026061
ODXC01000047
280462
Bacillota
GAA
Phe
>WENV181026058
ODXC01000038
398852
Bacillota
CTC
Glu
>WENV181026053
ODXC01000036
398852
Bacillota
CTC
Glu
>WENV181026045
ODXC01000030
398852
Bacillota
CTC
Glu
>WENV181026924
ODXC01026815
314878
Bacillota
GAA
Phe
>WENV181027185
ODXC01152659
201856
Bacillota
GAT
Ile
>WENV181026961
ODXC01032715
289123
Bacillota
GGT
Thr
>WENV181027076
ODXC01072540
360353
Bacillota
CTT
Lys
>WENV181026396
ODXC01000986
280483
Bacillota
GAA
Phe
>WENV181027158
ODXC01123452
285601
Bacillota
TTC
Glu
>WENV181026569
ODXC01002728
175857
Bacillota
GTG
His
>WENV181026214
ODXC01000245
175857
Bacillota
GTG
His
>WENV181026733
ODXC01007354
285756
Bacillota
GCC
Gly
>WENV181026397
ODXC01000986
285756
Bacillota
GCC
Gly
>WENV181026258
ODXC01000339
285756
Bacillota
GCC
Gly
>WENV181026856
ODXC01017712
398833
Bacillota
TGT
Thr
>WENV181026782
ODXC01009898
175849
Bacillota
GTC
Asp
>WENV181026216
ODXC01000245
280463
Bacillota
TTT
Lys
>WENV181027038
ODXC01055229
280486
Bacillota
TGC
Ala
>WENV181027006
ODXC01046631
280486
Bacillota
TGC
Ala
>WENV181026829
ODXC01013793
280486
Bacillota
TGC
Ala
>WENV181027106
ODXC01086055
405393
Bacillota
GCC
Gly
>WENV181026778
ODXC01009616
56074
Bacillota
TGA
Ser
>WENV181026439
ODXC01001332
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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