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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
146 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181032764
ODXN01000584
288834
Bacillota
TAC
Val
>WENV181033895
ODXN01036902
288834
Bacillota
TAC
Val
>WENV181032441
ODXN01000034
283303
Bacillota
GTC
Asp
>WENV181032740
ODXN01000527
283303
Bacillota
GTC
Asp
>WENV181033901
ODXN01036902
212982
Bacillota
ACG
Arg
>WENV181034319
ODXN01184955
280500
Bacillota
TGC
Ala
>WENV181033288
ODXN01004524
289121
Bacillota
CCA
Trp
>WENV181033983
ODXN01048398
184537
Bacillota
ACG
Arg
>WENV181032795
ODXN01000651
221826
Bacillota
ACG
Arg
>WENV181033786
ODXN01027135
221826
Bacillota
ACG
Arg
>WENV181033884
ODXN01035020
408526
Bacillota
GCA
Cys
>WENV181033659
ODXN01016831
296855
Bacillota
GGT
Thr
>WENV181033287
ODXN01004524
287508
Bacillota
GTG
His
>WENV181033887
ODXN01035151
48505
Bacillota
TGA
Ser
>WENV181033766
ODXN01024838
48505
Bacillota
TGA
Ser
>WENV181033439
ODXN01008027
48505
Bacillota
TGA
Ser
>WENV181033024
ODXN01001952
183994
Bacillota
TCT
Arg
>WENV181033550
ODXN01011043
231532
Bacillota
ACG
Arg
>WENV181033549
ODXN01011043
291629
Bacillota
CCA
Trp
>WENV181034013
ODXN01052624
289717
Bacillota
CTT
Lys
>WENV181033769
ODXN01025152
289717
Bacillota
CTT
Lys
>WENV181033666
ODXN01017226
289717
Bacillota
CTT
Lys
>WENV181033242
ODXN01003801
405874
Bacillota
TTC
Glu
>WENV181033007
ODXN01001868
405874
Bacillota
TTC
Glu
>WENV181034286
ODXN01165102
20932
Bacillota
GCT
Ser
>WENV181033289
ODXN01004550
20932
Bacillota
GCT
Ser
>WENV181033801
ODXN01028310
20932
Bacillota
GCT
Ser
>WENV181033817
ODXN01030788
20932
Bacillota
GCT
Ser
>WENV181034304
ODXN01182614
291553
Bacillota
GAA
Phe
>WENV181033376
ODXN01006099
291553
Bacillota
GAA
Phe
>WENV181032642
ODXN01000286
291553
Bacillota
GAA
Phe
>WENV181034234
ODXN01135539
283622
Bacillota
CTT
Lys
>WENV181033927
ODXN01040548
295166
Bacillota
TGC
Ala
>WENV181033698
ODXN01019242
482593
Bacillota
CCC
Gly
>WENV181034296
ODXN01175421
339995
Bacillota
TGC
Ala
>WENV181034270
ODXN01157264
339995
Bacillota
TGC
Ala
>WENV181034054
ODXN01059362
339995
Bacillota
TGC
Ala
>WENV181034038
ODXN01056613
339995
Bacillota
TGC
Ala
>WENV181034001
ODXN01050691
339995
Bacillota
TGC
Ala
>WENV181033576
ODXN01012168
339995
Bacillota
TGC
Ala
>WENV181034050
ODXN01057753
20942
Bacillota
GGA
Ser
>WENV181033578
ODXN01012345
20942
Bacillota
GGA
Ser
>WENV181033448
ODXN01008291
20942
Bacillota
GGA
Ser
>WENV181033347
ODXN01005591
20942
Bacillota
GGA
Ser
>WENV181032886
ODXN01001075
409321
Bacillota
TTC
Glu
>WENV181033062
ODXN01002227
100696
Bacillota
GTA
Tyr
>WENV181033041
ODXN01002114
100696
Bacillota
GTA
Tyr
>WENV181032985
ODXN01001805
100696
Bacillota
GTA
Tyr
>WENV181033008
ODXN01001868
287643
Bacillota
TAC
Val
>WENV181033243
ODXN01003801
287643
Bacillota
TAC
Val
>WENV181033453
ODXN01008312
287643
Bacillota
TAC
Val
>WENV181033063
ODXN01002227
187458
Bacillota
CAT
Met
>WENV181032986
ODXN01001805
187458
Bacillota
CAT
Met
>WENV181032888
ODXN01001075
338033
Bacillota
GAA
Phe
>WENV181033455
ODXN01008312
338033
Bacillota
GAA
Phe
>WENV181033085
ODXN01002472
183993
Bacillota
CAT
Met
>WENV181032984
ODXN01001805
356355
Bacillota
CAT
Met
>WENV181033040
ODXN01002114
356355
Bacillota
CAT
Met
>WENV181033084
ODXN01002472
289149
Bacillota
GGT
Thr
>WENV181033660
ODXN01016831
184495
Bacillota
CAT
Met
>WENV181032921
ODXN01001267
141202
Bacillota
CAA
Leu
>WENV181032723
ODXN01000497
47166
Bacillota
CGA
Ser
>WENV181033302
ODXN01004723
402739
Bacillota
CCG
Arg
>WENV181033239
ODXN01003801
289147
Bacillota
GTT
Asn
>WENV181033501
ODXN01009976
183957
Bacillota
CCT
Arg
>WENV181033413
ODXN01006940
156730
Bacillota
ACG
Arg
>WENV181033104
ODXN01002575
293309
Bacillota
GTT
Asn
>WENV181033656
ODXN01016831
289713
Bacillota
TGT
Thr
>WENV181033535
ODXN01010534
289713
Bacillota
TGT
Thr
>WENV181033532
ODXN01010496
289713
Bacillota
TGT
Thr
>WENV181034035
ODXN01056488
404091
Bacillota
TTG
Gln
>WENV181033461
ODXN01008312
110240
Bacillota
GAG
Leu
>WENV181033459
ODXN01008312
110240
Bacillota
GAG
Leu
>WENV181033437
ODXN01007901
187364
Bacillota
CAT
Met
>WENV181032989
ODXN01001829
187364
Bacillota
CAT
Met
>WENV181034034
ODXN01056488
289716
Bacillota
GTG
His
>WENV181033538
ODXN01010708
287380
Bacillota
CTT
Lys
>WENV181033452
ODXN01008312
287380
Bacillota
CTT
Lys
>WENV181032897
ODXN01001125
323864
Bacillota
TGC
Ala
>WENV181034281
ODXN01161902
432453
Bacillota
TTC
Glu
>WENV181034095
ODXN01065729
432453
Bacillota
TTC
Glu
>WENV181033106
ODXN01002575
432453
Bacillota
TTC
Glu
>WENV181034123
ODXN01075801
480337
Bacillota
TCC
Gly
>WENV181033897
ODXN01036902
301649
Bacillota
TTT
Lys
>WENV181032767
ODXN01000584
301649
Bacillota
TTT
Lys
>WENV181033428
ODXN01007510
404126
Bacillota
GCC
Gly
>WENV181033238
ODXN01003801
404126
Bacillota
GCC
Gly
>WENV181033195
ODXN01003452
404126
Bacillota
GCC
Gly
>WENV181032510
ODXN01000097
404126
Bacillota
GCC
Gly
>WENV181032887
ODXN01001075
179935
Bacillota
GTC
Asp
>WENV181033454
ODXN01008312
179935
Bacillota
GTC
Asp
>WENV181034090
ODXN01065259
398857
Bacillota
TTC
Glu
>WENV181032960
ODXN01001550
119459
Bacillota
TAG
Leu
>WENV181032957
ODXN01001525
119459
Bacillota
TAG
Leu
>WENV181033058
ODXN01002169
104114
Bacillota
CAG
Leu
>WENV181033707
ODXN01019918
104114
Bacillota
CAG
Leu
>WENV181033006
ODXN01001868
333281
Bacillota
GTT
Asn
>WENV181034297
ODXN01175422
280547
Bacillota
GTC
Asp
>WENV181033375
ODXN01006099
280547
Bacillota
GTC
Asp
>WENV181032641
ODXN01000286
280547
Bacillota
GTC
Asp
>WENV181034237
ODXN01136745
445407
Bacillota
GCC
Gly
>WENV181034187
ODXN01107876
445407
Bacillota
GCC
Gly
>WENV181033883
ODXN01035020
445407
Bacillota
GCC
Gly
>WENV181033610
ODXN01013599
445407
Bacillota
GCC
Gly
>WENV181033103
ODXN01002575
445407
Bacillota
GCC
Gly
>WENV181032507
ODXN01000097
289154
Bacillota
CTT
Lys
>WENV181034287
ODXN01165251
289761
Bacillota
TTT
Lys
>WENV181033716
ODXN01020701
289761
Bacillota
TTT
Lys
>WENV181033105
ODXN01002575
289761
Bacillota
TTT
Lys
>WENV181033148
ODXN01002993
403759
Bacillota
CTC
Glu
>WENV181032826
ODXN01000762
235661
Bacillota
GTC
Asp
>WENV181032721
ODXN01000495
25955
Bacillota
GCT
Ser
>WENV181034027
ODXN01054385
25955
Bacillota
GCT
Ser
>WENV181034254
ODXN01150896
283367
Bacillota
GCC
Gly
>WENV181033741
ODXN01022221
283367
Bacillota
GCC
Gly
>WENV181033237
ODXN01003786
283367
Bacillota
GCC
Gly
>WENV181032865
ODXN01001029
283367
Bacillota
GCC
Gly
>WENV181032730
ODXN01000503
283367
Bacillota
GCC
Gly
>WENV181033107
ODXN01002575
289715
Bacillota
TAC
Val
>WENV181034096
ODXN01065729
289715
Bacillota
TAC
Val
>WENV181034282
ODXN01161902
289715
Bacillota
TAC
Val
>WENV181033858
ODXN01032974
20943
Bacillota
CGA
Ser
>WENV181034063
ODXN01060866
20943
Bacillota
CGA
Ser
>WENV181034292
ODXN01170092
20943
Bacillota
CGA
Ser
>WENV181032765
ODXN01000584
141141
Bacillota
GTA
Tyr
>WENV181032444
ODXN01000034
141141
Bacillota
GTA
Tyr
>WENV181034106
ODXN01069010
118370
Bacillota
TAG
Leu
>WENV181033938
ODXN01041659
444984
Bacillota
GCC
Gly
>WENV181034122
ODXN01075801
208539
Bacillota
TGG
Pro
>WENV181033640
ODXN01016245
208539
Bacillota
TGG
Pro
>WENV181033856
ODXN01032939
321248
Bacillota
TAC
Val
>WENV181033369
ODXN01005959
321248
Bacillota
TAC
Val
>WENV181034124
ODXN01075801
184539
Bacillota
TCT
Arg
>WENV181033539
ODXN01010769
183995
Bacillota
GGG
Pro
>WENV181033460
ODXN01008312
100945
Bacillota
CAG
Leu
>WENV181032672
ODXN01000398
403766
Bacillota
TTG
Gln
>WENV181033991
ODXN01050075
317820
Bacillota
TAC
Val
>WENV181032511
ODXN01000097
489283
Bacillota
GCA
Cys
>WENV181034325
ODXN01185904
280486
Bacillota
TGC
Ala
>WENV181034102
ODXN01068695
280486
Bacillota
TGC
Ala
>WENV181034049
ODXN01057483
280486
Bacillota
TGC
Ala
>WENV181034039
ODXN01056761
280486
Bacillota
TGC
Ala
>WENV181033580
ODXN01012404
280486
Bacillota
TGC
Ala
>WENV181033706
ODXN01019895
289124
Bacillota
GTT
Asn
>WENV181033449
ODXN01008312
289124
Bacillota
GTT
Asn
>WENV181033676
ODXN01017594
482078
Bacillota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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