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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
116 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181218695
OFCN01000016
481233
Actinomycetota
CCC
Gly
>WENV181218768
OFCN01000040
179231
Actinomycetota
TAC
Val
>WENV181218698
OFCN01000017
176499
Actinomycetota
CAT
Met
>WENV181218818
OFCN01000082
176499
Actinomycetota
CAT
Met
>WENV181218840
OFCN01000135
175883
Actinomycetota
GAT
Ile
>WENV181218842
OFCN01000135
175883
Actinomycetota
GAT
Ile
>WENV181218703
OFCN01000018
283311
Actinomycetota
CCT
Arg
>WENV181218691
OFCN01000015
349003
Actinomycetota
CCG
Arg
>WENV181218636
OFCN01000004
280498
Actinomycetota
GTT
Asn
>WENV181218621
OFCN01000002
280498
Actinomycetota
GTT
Asn
>WENV181218617
OFCN01000002
280498
Actinomycetota
GTT
Asn
>WENV181218729
OFCN01000025
316729
Actinomycetota
CAC
Val
>WENV181218755
OFCN01000035
280503
Actinomycetota
CCT
Arg
>WENV181218610
OFCN01000001
184065
Actinomycetota
TGG
Pro
>WENV181218725
OFCN01000025
295964
Actinomycetota
GTT
Asn
>WENV181218635
OFCN01000004
295964
Actinomycetota
GTT
Asn
>WENV181219045
OFCN01002062
140768
Actinomycetota
TAG
Leu
>WENV181218800
OFCN01000066
140768
Actinomycetota
TAG
Leu
>WENV181219056
OFCN01002174
284890
Actinomycetota
CTT
Lys
>WENV181218701
OFCN01000017
56384
Actinomycetota
TGA
Ser
>WENV181218828
OFCN01000098
176075
Actinomycetota
TCT
Arg
>WENV181218741
OFCN01000028
176075
Actinomycetota
TCT
Arg
>WENV181218815
OFCN01000078
175848
Actinomycetota
TGG
Pro
>WENV181218637
OFCN01000004
176078
Actinomycetota
GGG
Pro
>WENV181218719
OFCN01000023
176078
Actinomycetota
GGG
Pro
>WENV181218814
OFCN01000078
482604
Actinomycetota
TTG
Gln
>WENV181218724
OFCN01000025
482604
Actinomycetota
TTG
Gln
>WENV181219143
OFCN01006316
284889
Actinomycetota
CTC
Glu
>WENV181218751
OFCN01000034
59689
Actinomycetota
GGA
Ser
>WENV181218688
OFCN01000015
59689
Actinomycetota
GGA
Ser
>WENV181218813
OFCN01000078
175837
Actinomycetota
ACG
Arg
>WENV181218812
OFCN01000078
175837
Actinomycetota
ACG
Arg
>WENV181218738
OFCN01000027
29393
Actinomycetota
GCT
Ser
>WENV181218778
OFCN01000043
280549
Actinomycetota
CAC
Val
>WENV181218722
OFCN01000024
184493
Actinomycetota
GGG
Pro
>WENV181218616
OFCN01000001
443526
Actinomycetota
CAC
Val
>WENV181218699
OFCN01000017
24925
Actinomycetota
GCT
Ser
>WENV181218700
OFCN01000017
56383
Actinomycetota
CGA
Ser
>WENV181218793
OFCN01000055
20450
Actinomycetota
GAG
Leu
>WENV181218837
OFCN01000131
280441
Actinomycetota
CCG
Arg
>WENV181218811
OFCN01000078
280702
Actinomycetota
GGC
Ala
>WENV181218810
OFCN01000078
280702
Actinomycetota
GGC
Ala
>WENV181218677
OFCN01000013
140878
Actinomycetota
TAA
Leu
>WENV181218651
OFCN01000006
398843
Actinomycetota
GTT
Asn
>WENV181218650
OFCN01000006
398843
Actinomycetota
GTT
Asn
>WENV181218777
OFCN01000043
434162
Actinomycetota
GAC
Val
>WENV181218667
OFCN01000008
176077
Actinomycetota
CAT
Met
>WENV181218654
OFCN01000006
298224
Actinomycetota
GGC
Ala
>WENV181218693
OFCN01000016
418858
Actinomycetota
CTG
Gln
>WENV181218742
OFCN01000028
283312
Actinomycetota
GTG
His
>WENV181218626
OFCN01000002
176638
Actinomycetota
GGG
Pro
>WENV181218638
OFCN01000005
285876
Actinomycetota
CGT
Thr
>WENV181218760
OFCN01000036
280524
Actinomycetota
TGC
Ala
>WENV181218748
OFCN01000031
280524
Actinomycetota
TGC
Ala
>WENV181218745
OFCN01000030
280524
Actinomycetota
TGC
Ala
>WENV181218772
OFCN01000041
283313
Actinomycetota
CCG
Arg
>WENV181218763
OFCN01000038
398948
Actinomycetota
TTC
Glu
>WENV181218664
OFCN01000008
398948
Actinomycetota
TTC
Glu
>WENV181218836
OFCN01000120
150272
Actinomycetota
TAA
Leu
>WENV181218736
OFCN01000027
117777
Actinomycetota
>WENV181218697
OFCN01000017
117777
Actinomycetota
>WENV181219008
OFCN01001694
280744
Actinomycetota
GTG
His
>WENV181218761
OFCN01000036
280523
Actinomycetota
GGC
Ala
>WENV181218723
OFCN01000025
280523
Actinomycetota
GGC
Ala
>WENV181218620
OFCN01000002
280523
Actinomycetota
GGC
Ala
>WENV181218737
OFCN01000027
175949
Actinomycetota
CAT
Met
>WENV181218780
OFCN01000046
227544
Actinomycetota
TAC
Val
>WENV181218779
OFCN01000045
227544
Actinomycetota
TAC
Val
>WENV181218746
OFCN01000031
191955
Actinomycetota
TGT
Thr
>WENV181218717
OFCN01000022
175841
Actinomycetota
TAT
Ile
>WENV181218720
OFCN01000023
20415
Actinomycetota
GAG
Leu
>WENV181218834
OFCN01000111
280544
Actinomycetota
GTG
His
>WENV181218862
OFCN01000171
280536
Actinomycetota
CTT
Lys
>WENV181218712
OFCN01000022
175872
Actinomycetota
GTC
Asp
>WENV181218716
OFCN01000022
175872
Actinomycetota
GTC
Asp
>WENV181218668
OFCN01000008
280703
Actinomycetota
CCT
Arg
>WENV181218847
OFCN01000143
140879
Actinomycetota
TAG
Leu
>WENV181218819
OFCN01000082
20205
Actinomycetota
GCT
Ser
>WENV181218754
OFCN01000035
175926
Actinomycetota
CAT
Met
>WENV181218766
OFCN01000038
178569
Actinomycetota
CAT
Met
>WENV181218820
OFCN01000085
280450
Actinomycetota
TTT
Lys
>WENV181218689
OFCN01000015
280450
Actinomycetota
TTT
Lys
>WENV181219148
OFCN01006918
124580
Actinomycetota
GTA
Tyr
>WENV181218799
OFCN01000066
323758
Actinomycetota
CGT
Thr
>WENV181218757
OFCN01000036
480329
Actinomycetota
CCC
Gly
>WENV181218753
OFCN01000034
480329
Actinomycetota
CCC
Gly
>WENV181218739
OFCN01000027
56451
Actinomycetota
CGA
Ser
>WENV181218784
OFCN01000048
483206
Actinomycetota
CTG
Gln
>WENV181218734
OFCN01000026
175882
Actinomycetota
TGG
Pro
>WENV181218731
OFCN01000026
20209
Actinomycetota
GAG
Leu
>WENV181218613
OFCN01000001
423412
Actinomycetota
GAC
Val
>WENV181219108
OFCN01004048
284887
Actinomycetota
GCC
Gly
>WENV181218752
OFCN01000034
99865
Actinomycetota
CAG
Leu
>WENV181218694
OFCN01000016
99865
Actinomycetota
CAG
Leu
>WENV181218769
OFCN01000041
222475
Actinomycetota
CTT
Lys
>WENV181218690
OFCN01000015
222475
Actinomycetota
CTT
Lys
>WENV181218619
OFCN01000002
480319
Actinomycetota
TTG
Gln
>WENV181218789
OFCN01000050
280489
Actinomycetota
CTC
Glu
>WENV181218802
OFCN01000071
280499
Actinomycetota
CCT
Arg
>WENV181218790
OFCN01000050
398853
Actinomycetota
CTG
Gln
>WENV181218771
OFCN01000041
398853
Actinomycetota
CTG
Gln
>WENV181218831
OFCN01000104
175843
Actinomycetota
CAA
Leu
>WENV181218733
OFCN01000026
175843
Actinomycetota
CAA
Leu
>WENV181218678
OFCN01000013
175843
Actinomycetota
CAA
Leu
>WENV181218718
OFCN01000022
203883
Actinomycetota
TCT
Arg
>WENV181218873
OFCN01000236
46642
Actinomycetota
CGA
Ser
>WENV181218758
OFCN01000036
104211
Actinomycetota
CAG
Leu
>WENV181218817
OFCN01000082
117903
Actinomycetota
GTA
Tyr
>WENV181218714
OFCN01000022
56071
Actinomycetota
TGA
Ser
>WENV181218747
OFCN01000031
179238
Actinomycetota
GAT
Ile
>WENV181218740
OFCN01000027
60767
Actinomycetota
TGA
Ser
>WENV181218732
OFCN01000026
147796
Actinomycetota
TAA
Leu
>WENV181219044
OFCN01002062
280470
Actinomycetota
CGT
Thr
>WENV181218846
OFCN01000143
280470
Actinomycetota
CGT
Thr
>WENV181218606
OFCN01000001
442299
Actinomycetota
CTG
Gln
>WENV181218711
OFCN01000021
482493
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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