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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181233229
OFES01000015
284284
Chlorobiota
GGC
Ala
>WENV181233233
OFES01000017
230640
Chlorobiota
GAT
Ile
>WENV181233213
OFES01000006
284278
Chlorobiota
CCT
Arg
>WENV181233224
OFES01000010
284278
Chlorobiota
CCT
Arg
>WENV181233239
OFES01000025
282274
Chlorobiota
CGC
Ala
>WENV181233234
OFES01000017
285593
Chlorobiota
TGC
Ala
>WENV181233241
OFES01000027
177570
Chlorobiota
GGG
Pro
>WENV181233254
OFES01000031
177570
Chlorobiota
GGG
Pro
>WENV181233206
OFES01000002
281169
Chlorobiota
CAT
Met
>WENV181233259
OFES01000039
281169
Chlorobiota
CAT
Met
>WENV181233219
OFES01000008
118002
Chlorobiota
CAG
Leu
>WENV181233253
OFES01000030
118002
Chlorobiota
CAG
Leu
>WENV181233208
OFES01000003
118653
Chlorobiota
GAG
Leu
>WENV181233227
OFES01000012
118653
Chlorobiota
GAG
Leu
>WENV181233205
OFES01000001
284281
Chlorobiota
GAA
Phe
>WENV181233225
OFES01000011
284281
Chlorobiota
GAA
Phe
>WENV181233207
OFES01000003
284279
Chlorobiota
TTT
Lys
>WENV181233226
OFES01000012
284279
Chlorobiota
TTT
Lys
>WENV181233203
OFES01000001
156343
Chlorobiota
GTC
Asp
>WENV181233222
OFES01000009
156343
Chlorobiota
GTC
Asp
>WENV181233216
OFES01000007
282471
Chlorobiota
CGG
Pro
>WENV181233221
OFES01000008
282471
Chlorobiota
CGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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