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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181325458
OFLJ01000912
402532
Bacteroidota
GCC
Gly
>WENV181325604
OFLJ01008293
402390
Bacteroidota
TTC
Glu
>WENV181325892
OFLJ01043897
120026
Bacteroidota
GTA
Tyr
>WENV181325959
OFLJ01056536
120026
Bacteroidota
GTA
Tyr
>WENV181325902
OFLJ01045346
156605
Bacteroidota
GAC
Val
>WENV181325893
OFLJ01043897
281336
Bacteroidota
TCC
Gly
>WENV181325847
OFLJ01034094
223263
Bacteroidota
GTT
Asn
>WENV181325546
OFLJ01004278
155786
Bacteroidota
TGG
Pro
>WENV181325545
OFLJ01004278
155786
Bacteroidota
TGG
Pro
>WENV181325786
OFLJ01026024
155786
Bacteroidota
TGG
Pro
>WENV181325787
OFLJ01026024
176707
Bacteroidota
TCT
Arg
>WENV181325544
OFLJ01004278
74253
Bacteroidota
GCT
Ser
>WENV181325977
OFLJ01060460
74253
Bacteroidota
GCT
Ser
>WENV181325654
OFLJ01011761
399285
Bacteroidota
TTC
Glu
>WENV181325453
OFLJ01000891
227539
Bacteroidota
GTT
Asn
>WENV181325896
OFLJ01044098
176427
Bacteroidota
TGG
Pro
>WENV181325647
OFLJ01010802
172063
Bacteroidota
TAC
Val
>WENV181325869
OFLJ01037753
200516
Bacteroidota
CAT
Met
>WENV181325635
OFLJ01010194
206043
Bacteroidota
GTC
Asp
>WENV181325566
OFLJ01005655
118749
Bacteroidota
GTA
Tyr
>WENV181325679
OFLJ01014338
372845
Bacteroidota
CCA
Trp
>WENV181325618
OFLJ01009118
372845
Bacteroidota
CCA
Trp
>WENV181325979
OFLJ01060460
197245
Bacteroidota
TCT
Arg
>WENV181325414
OFLJ01000512
176817
Bacteroidota
CAT
Met
>WENV181325710
OFLJ01017119
460957
Bacteroidota
GCC
Gly
>WENV181325565
OFLJ01005534
176699
Bacteroidota
GTT
Asn
>WENV181325824
OFLJ01030041
437306
Bacteroidota
TTC
Glu
>WENV181325978
OFLJ01060460
156424
Bacteroidota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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