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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181340912
OFMH01003132
141501
Fusobacteriota
TGA
Ser
>WENV181340391
OFMH01000058
183767
Fusobacteriota
TGC
Ala
>WENV181340637
OFMH01000709
407547
Fusobacteriota
TTG
Gln
>WENV181341039
OFMH01005807
184470
Fusobacteriota
CAT
Met
>WENV181340596
OFMH01000575
175943
Fusobacteriota
CAT
Met
>WENV181340911
OFMH01003130
222433
Fusobacteriota
CCT
Arg
>WENV181341030
OFMH01005717
407549
Fusobacteriota
TTC
Glu
>WENV181341029
OFMH01005717
288878
Fusobacteriota
TGT
Thr
>WENV181340616
OFMH01000639
362179
Fusobacteriota
GTT
Asn
>WENV181341028
OFMH01005717
484173
Fusobacteriota
GCA
Cys
>WENV181340411
OFMH01000095
184469
Fusobacteriota
TGG
Pro
>WENV181340913
OFMH01003132
21367
Fusobacteriota
GCT
Ser
>WENV181340573
OFMH01000483
189273
Fusobacteriota
GTC
Asp
>WENV181340572
OFMH01000483
295075
Fusobacteriota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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