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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
75 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181493185
OGFZ01013715
180990
Bacillota
CGG
Pro
>WENV181493124
OGFZ01006247
401879
Bacillota
TTG
Gln
>WENV181493201
OGFZ01017951
99852
Bacillota
GTA
Tyr
>WENV181493172
OGFZ01010486
343590
Bacillota
GCC
Gly
>WENV181493173
OGFZ01010486
343590
Bacillota
GCC
Gly
>WENV181493065
OGFZ01001942
349107
Bacillota
GCC
Gly
>WENV181493194
OGFZ01016128
405363
Bacillota
GCA
Cys
>WENV181493047
OGFZ01001492
184537
Bacillota
ACG
Arg
>WENV181493064
OGFZ01001942
280428
Bacillota
GAA
Phe
>WENV181492881
OGFZ01000125
408526
Bacillota
GCA
Cys
>WENV181493177
OGFZ01010971
356660
Bacillota
CTT
Lys
>WENV181493126
OGFZ01006247
56397
Bacillota
CAA
Leu
>WENV181493034
OGFZ01001324
296855
Bacillota
GGT
Thr
>WENV181493155
OGFZ01008472
281413
Bacillota
TGT
Thr
>WENV181492969
OGFZ01000532
48505
Bacillota
TGA
Ser
>WENV181493202
OGFZ01018027
280492
Bacillota
CTT
Lys
>WENV181493166
OGFZ01009868
175842
Bacillota
CAC
Val
>WENV181493213
OGFZ01023068
184497
Bacillota
GGG
Pro
>WENV181493061
OGFZ01001906
289717
Bacillota
CTT
Lys
>WENV181492898
OGFZ01000188
179176
Bacillota
ACG
Arg
>WENV181493010
OGFZ01000962
20932
Bacillota
GCT
Ser
>WENV181493062
OGFZ01001909
190476
Bacillota
CAT
Met
>WENV181493138
OGFZ01006973
482593
Bacillota
CCC
Gly
>WENV181493137
OGFZ01006947
482593
Bacillota
CCC
Gly
>WENV181493210
OGFZ01020178
339995
Bacillota
TGC
Ala
>WENV181492907
OGFZ01000244
20942
Bacillota
GGA
Ser
>WENV181493007
OGFZ01000908
73664
Bacillota
CAG
Leu
>WENV181493176
OGFZ01010929
280447
Bacillota
GAC
Val
>WENV181493190
OGFZ01014829
73009
Bacillota
CAG
Leu
>WENV181493125
OGFZ01006247
501142
Bacillota
GCA
Cys
>WENV181493101
OGFZ01004545
180991
Bacillota
TCT
Arg
>WENV181493114
OGFZ01006095
46953
Bacillota
AAG
Leu
>WENV181493135
OGFZ01006905
291581
Bacillota
CGG
Pro
>WENV181493117
OGFZ01006163
175859
Bacillota
TCT
Arg
>WENV181493123
OGFZ01006247
285949
Bacillota
GTG
His
>WENV181493078
OGFZ01002665
175831
Bacillota
ACG
Arg
>WENV181493035
OGFZ01001324
184495
Bacillota
CAT
Met
>WENV181493096
OGFZ01004360
141202
Bacillota
CAA
Leu
>WENV181492966
OGFZ01000505
141202
Bacillota
CAA
Leu
>WENV181492876
OGFZ01000115
141202
Bacillota
CAA
Leu
>WENV181492993
OGFZ01000691
510876
Bacillota
GGT
Thr
>WENV181493011
OGFZ01000975
284627
Bacillota
GAA
Phe
>WENV181493140
OGFZ01007369
285946
Bacillota
GGT
Thr
>WENV181493085
OGFZ01003187
180992
Bacillota
CCT
Arg
>WENV181493109
OGFZ01005006
293309
Bacillota
GTT
Asn
>WENV181493031
OGFZ01001324
289713
Bacillota
TGT
Thr
>WENV181493098
OGFZ01004451
404091
Bacillota
TTG
Gln
>WENV181492827
OGFZ01000025
27216
Bacillota
GCT
Ser
>WENV181493134
OGFZ01006905
480322
Bacillota
CTG
Gln
>WENV181493203
OGFZ01018137
175868
Bacillota
GTT
Asn
>WENV181493097
OGFZ01004451
289716
Bacillota
GTG
His
>WENV181493115
OGFZ01006134
398854
Bacillota
CTC
Glu
>WENV181493223
OGFZ01025825
291576
Bacillota
CCC
Gly
>WENV181492903
OGFZ01000208
497729
Bacillota
CCA
Trp
>WENV181493136
OGFZ01006923
56079
Bacillota
AAG
Leu
>WENV181493154
OGFZ01008472
100512
Bacillota
TAG
Leu
>WENV181493110
OGFZ01005006
432453
Bacillota
TTC
Glu
>WENV181493086
OGFZ01003296
280444
Bacillota
GGT
Thr
>WENV181493068
OGFZ01001972
119459
Bacillota
TAG
Leu
>WENV181493048
OGFZ01001492
119459
Bacillota
TAG
Leu
>WENV181493122
OGFZ01006247
480918
Bacillota
>WENV181493179
OGFZ01012173
179755
Bacillota
CCG
Arg
>WENV181493102
OGFZ01004720
280547
Bacillota
GTC
Asp
>WENV181492878
OGFZ01000125
280547
Bacillota
GTC
Asp
>WENV181492880
OGFZ01000125
445407
Bacillota
GCC
Gly
>WENV181493120
OGFZ01006247
283719
Bacillota
GAA
Phe
>WENV181493063
OGFZ01001909
398832
Bacillota
TTC
Glu
>WENV181493121
OGFZ01006247
114009
Bacillota
GTA
Tyr
>WENV181492957
OGFZ01000445
118669
Bacillota
GTA
Tyr
>WENV181492947
OGFZ01000420
52748
Bacillota
TGA
Ser
>WENV181493169
OGFZ01010253
74129
Bacillota
CAG
Leu
>WENV181493111
OGFZ01005006
289715
Bacillota
TAC
Val
>WENV181492909
OGFZ01000247
20943
Bacillota
CGA
Ser
>WENV181493199
OGFZ01017401
398852
Bacillota
CTC
Glu
>WENV181493128
OGFZ01006501
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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