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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181741912
OGQK01004313
99852
Bacillota
GTA
Tyr
>WENV181742349
OGQK01034878
405363
Bacillota
GCA
Cys
>WENV181742022
OGQK01008342
280428
Bacillota
GAA
Phe
>WENV181741439
OGQK01000198
291579
Bacillota
GAA
Phe
>WENV181741382
OGQK01000109
480359
Bacillota
TCC
Gly
>WENV181741861
OGQK01003146
175842
Bacillota
CAC
Val
>WENV181741971
OGQK01006203
184497
Bacillota
GGG
Pro
>WENV181741987
OGQK01006457
195149
Bacillota
GTC
Asp
>WENV181741840
OGQK01002685
5692
Bacillota
GCT
Ser
>WENV181742406
OGQK01042058
175825
Bacillota
GAT
Ile
>WENV181741561
OGQK01000597
73009
Bacillota
CAG
Leu
>WENV181742453
OGQK01062561
481217
Bacillota
GCA
Cys
>WENV181742090
OGQK01010490
189473
Bacillota
GAT
Ile
>WENV181742432
OGQK01051876
480519
Bacillota
TCC
Gly
>WENV181741369
OGQK01000095
291581
Bacillota
CGG
Pro
>WENV181742132
OGQK01012598
175859
Bacillota
TCT
Arg
>WENV181742405
OGQK01042058
280436
Bacillota
TGC
Ala
>WENV181742072
OGQK01009776
175831
Bacillota
ACG
Arg
>WENV181741456
OGQK01000261
187589
Bacillota
CAT
Met
>WENV181741681
OGQK01001177
284627
Bacillota
GAA
Phe
>WENV181741544
OGQK01000558
294020
Bacillota
TAC
Val
>WENV181741629
OGQK01000878
179706
Bacillota
CAT
Met
>WENV181741368
OGQK01000095
480322
Bacillota
CTG
Gln
>WENV181741826
OGQK01002584
401685
Bacillota
TTG
Gln
>WENV181741944
OGQK01005265
175868
Bacillota
GTT
Asn
>WENV181742191
OGQK01015851
322848
Bacillota
CTT
Lys
>WENV181741943
OGQK01005265
398854
Bacillota
CTC
Glu
>WENV181742156
OGQK01013921
291576
Bacillota
CCC
Gly
>WENV181741932
OGQK01004995
480324
Bacillota
TTG
Gln
>WENV181742278
OGQK01025157
407858
Bacillota
GCC
Gly
>WENV181742187
OGQK01015484
303718
Bacillota
TGT
Thr
>WENV181741625
OGQK01000878
46655
Bacillota
TGA
Ser
>WENV181741977
OGQK01006277
398857
Bacillota
TTC
Glu
>WENV181741812
OGQK01002449
280444
Bacillota
GGT
Thr
>WENV181742023
OGQK01008342
321753
Bacillota
GCC
Gly
>WENV181741874
OGQK01003586
179755
Bacillota
CCG
Arg
>WENV181741552
OGQK01000584
58120
Bacillota
AAG
Leu
>WENV181742255
OGQK01022798
398832
Bacillota
TTC
Glu
>WENV181742433
OGQK01051876
203851
Bacillota
TCT
Arg
>WENV181742084
OGQK01010176
280476
Bacillota
TTT
Lys
>WENV181741751
OGQK01001699
118359
Bacillota
GTA
Tyr
>WENV181742359
OGQK01035756
201856
Bacillota
GAT
Ile
>WENV181741825
OGQK01002584
175857
Bacillota
GTG
His
>WENV181741260
OGQK01000004
285756
Bacillota
GCC
Gly
>WENV181742389
OGQK01039333
285556
Bacillota
TGT
Thr
>WENV181741811
OGQK01002449
175849
Bacillota
GTC
Asp
>WENV181741839
OGQK01002685
56074
Bacillota
TGA
Ser
>WENV181742040
OGQK01008912
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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