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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
71 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181776967
OGRG01016639
377363
Bacillota
GAA
Phe
>WENV181776285
OGRG01000753
343590
Bacillota
GCC
Gly
>WENV181777068
OGRG01024910
280500
Bacillota
TGC
Ala
>WENV181777007
OGRG01019117
349107
Bacillota
GCC
Gly
>WENV181776148
OGRG01000265
290391
Bacillota
TAC
Val
>WENV181776705
OGRG01006445
290391
Bacillota
TAC
Val
>WENV181776960
OGRG01016492
280428
Bacillota
GAA
Phe
>WENV181777008
OGRG01019117
280466
Bacillota
TAC
Val
>WENV181776578
OGRG01003468
280492
Bacillota
CTT
Lys
>WENV181777218
OGRG01059137
280642
Bacillota
TTG
Gln
>WENV181777219
OGRG01059137
280639
Bacillota
TTT
Lys
>WENV181776614
OGRG01004327
228119
Bacillota
TCT
Arg
>WENV181776366
OGRG01001167
184497
Bacillota
GGG
Pro
>WENV181776097
OGRG01000129
184497
Bacillota
GGG
Pro
>WENV181777227
OGRG01060352
298270
Bacillota
TAC
Val
>WENV181777061
OGRG01023986
376224
Bacillota
TGG
Pro
>WENV181776083
OGRG01000097
179176
Bacillota
ACG
Arg
>WENV181777074
OGRG01025411
20932
Bacillota
GCT
Ser
>WENV181777217
OGRG01059137
176014
Bacillota
TCT
Arg
>WENV181776234
OGRG01000538
82124
Bacillota
TAA
Leu
>WENV181776276
OGRG01000708
73664
Bacillota
CAG
Leu
>WENV181777018
OGRG01019672
280447
Bacillota
GAC
Val
>WENV181776435
OGRG01001769
284723
Bacillota
TAC
Val
>WENV181776598
OGRG01003988
481217
Bacillota
GCA
Cys
>WENV181776791
OGRG01008467
140815
Bacillota
TAG
Leu
>WENV181777144
OGRG01039322
291581
Bacillota
CGG
Pro
>WENV181776870
OGRG01011729
175859
Bacillota
TCT
Arg
>WENV181776675
OGRG01005516
175831
Bacillota
ACG
Arg
>WENV181776277
OGRG01000714
284627
Bacillota
GAA
Phe
>WENV181776729
OGRG01006679
399041
Bacillota
CCA
Trp
>WENV181776160
OGRG01000293
27216
Bacillota
GCT
Ser
>WENV181776558
OGRG01003237
480322
Bacillota
CTG
Gln
>WENV181777052
OGRG01022858
399272
Bacillota
GCA
Cys
>WENV181776113
OGRG01000161
187364
Bacillota
CAT
Met
>WENV181776737
OGRG01006836
175868
Bacillota
GTT
Asn
>WENV181777157
OGRG01042577
314834
Bacillota
TGC
Ala
>WENV181776595
OGRG01003921
120584
Bacillota
GTA
Tyr
>WENV181776998
OGRG01018866
398854
Bacillota
CTC
Glu
>WENV181776802
OGRG01009068
480324
Bacillota
TTG
Gln
>WENV181776415
OGRG01001608
497729
Bacillota
CCA
Trp
>WENV181776886
OGRG01012355
175899
Bacillota
GTC
Asp
>WENV181777072
OGRG01025283
303718
Bacillota
TGT
Thr
>WENV181776439
OGRG01001805
56079
Bacillota
AAG
Leu
>WENV181776275
OGRG01000708
56079
Bacillota
AAG
Leu
>WENV181776867
OGRG01011627
323864
Bacillota
TGC
Ala
>WENV181777054
OGRG01023322
398857
Bacillota
TTC
Glu
>WENV181777201
OGRG01054442
204381
Bacillota
GAT
Ile
>WENV181776245
OGRG01000580
117745
Bacillota
GTA
Tyr
>WENV181777000
OGRG01018921
280444
Bacillota
GGT
Thr
>WENV181776150
OGRG01000266
483485
Bacillota
CCC
Gly
>WENV181777154
OGRG01040932
223045
Bacillota
GAT
Ile
>WENV181777228
OGRG01060352
235661
Bacillota
GTC
Asp
>WENV181777063
OGRG01023986
203851
Bacillota
TCT
Arg
>WENV181776421
OGRG01001704
449573
Bacillota
>WENV181776779
OGRG01008250
24146
Bacillota
GCT
Ser
>WENV181776498
OGRG01002396
52748
Bacillota
TGA
Ser
>WENV181776324
OGRG01000915
282755
Bacillota
GGT
Thr
>WENV181776301
OGRG01000816
280476
Bacillota
TTT
Lys
>WENV181776256
OGRG01000620
280476
Bacillota
TTT
Lys
>WENV181776199
OGRG01000413
280462
Bacillota
GAA
Phe
>WENV181776470
OGRG01002059
398852
Bacillota
CTC
Glu
>WENV181776290
OGRG01000765
398852
Bacillota
CTC
Glu
>WENV181776424
OGRG01001704
399260
Bacillota
TGT
Thr
>WENV181776496
OGRG01002390
118359
Bacillota
GTA
Tyr
>WENV181777170
OGRG01045922
201856
Bacillota
GAT
Ile
>WENV181776708
OGRG01006445
285756
Bacillota
GCC
Gly
>WENV181777029
OGRG01020495
398833
Bacillota
TGT
Thr
>WENV181777001
OGRG01018921
175849
Bacillota
GTC
Asp
>WENV181777113
OGRG01032514
280486
Bacillota
TGC
Ala
>WENV181776859
OGRG01011169
56074
Bacillota
TGA
Ser
>WENV181777117
OGRG01033166
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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