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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
70 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181883735
OGXI01010841
99852
Bacillota
GTA
Tyr
>WENV181882740
OGXI01000330
343590
Bacillota
GCC
Gly
>WENV181882741
OGXI01000330
343590
Bacillota
GCC
Gly
>WENV181884134
OGXI01046731
234991
Bacillota
GAT
Ile
>WENV181884055
OGXI01033456
280500
Bacillota
TGC
Ala
>WENV181882892
OGXI01000680
349107
Bacillota
GCC
Gly
>WENV181884041
OGXI01031250
405363
Bacillota
GCA
Cys
>WENV181882605
OGXI01000097
290391
Bacillota
TAC
Val
>WENV181883946
OGXI01022548
280428
Bacillota
GAA
Phe
>WENV181884027
OGXI01030007
291579
Bacillota
GAA
Phe
>WENV181883286
OGXI01003321
229015
Bacillota
GTG
His
>WENV181882923
OGXI01000746
179917
Bacillota
CAT
Met
>WENV181882893
OGXI01000680
280466
Bacillota
TAC
Val
>WENV181882700
OGXI01000245
280492
Bacillota
CTT
Lys
>WENV181883976
OGXI01024863
175842
Bacillota
CAC
Val
>WENV181884138
OGXI01046900
291629
Bacillota
CCA
Trp
>WENV181883806
OGXI01014179
236579
Bacillota
GAT
Ile
>WENV181883067
OGXI01001496
184497
Bacillota
GGG
Pro
>WENV181883405
OGXI01004578
179176
Bacillota
ACG
Arg
>WENV181882866
OGXI01000623
179176
Bacillota
ACG
Arg
>WENV181882733
OGXI01000316
229487
Bacillota
GTC
Asp
>WENV181883805
OGXI01014179
295166
Bacillota
TGC
Ala
>WENV181883124
OGXI01001862
190476
Bacillota
CAT
Met
>WENV181882904
OGXI01000696
73664
Bacillota
CAG
Leu
>WENV181883984
OGXI01025563
280447
Bacillota
GAC
Val
>WENV181883374
OGXI01004276
280447
Bacillota
GAC
Val
>WENV181884169
OGXI01051232
203929
Bacillota
TCT
Arg
>WENV181882920
OGXI01000746
284723
Bacillota
TAC
Val
>WENV181883589
OGXI01007097
73009
Bacillota
CAG
Leu
>WENV181883302
OGXI01003445
175859
Bacillota
TCT
Arg
>WENV181882612
OGXI01000119
290325
Bacillota
GCC
Gly
>WENV181883454
OGXI01005038
21311
Bacillota
GCT
Ser
>WENV181884202
OGXI01060676
175831
Bacillota
ACG
Arg
>WENV181883285
OGXI01003321
179810
Bacillota
TCT
Arg
>WENV181882755
OGXI01000360
284627
Bacillota
GAA
Phe
>WENV181883971
OGXI01024460
176657
Bacillota
GTC
Asp
>WENV181882674
OGXI01000201
484885
Bacillota
TCC
Gly
>WENV181883504
OGXI01005862
480322
Bacillota
CTG
Gln
>WENV181883765
OGXI01011670
175868
Bacillota
GTT
Asn
>WENV181883831
OGXI01015001
322848
Bacillota
CTT
Lys
>WENV181883830
OGXI01015001
398854
Bacillota
CTC
Glu
>WENV181883668
OGXI01009040
291576
Bacillota
CCC
Gly
>WENV181883823
OGXI01014709
480324
Bacillota
TTG
Gln
>WENV181883419
OGXI01004737
480324
Bacillota
TTG
Gln
>WENV181884114
OGXI01040851
400963
Bacillota
GTT
Asn
>WENV181882998
OGXI01001107
497729
Bacillota
CCA
Trp
>WENV181883108
OGXI01001769
303718
Bacillota
TGT
Thr
>WENV181883890
OGXI01018195
323864
Bacillota
TGC
Ala
>WENV181883492
OGXI01005729
175911
Bacillota
GTC
Asp
>WENV181884260
OGXI01077907
398857
Bacillota
TTC
Glu
>WENV181884218
OGXI01067107
204381
Bacillota
GAT
Ile
>WENV181883764
OGXI01011630
280444
Bacillota
GGT
Thr
>WENV181882694
OGXI01000235
483485
Bacillota
CCC
Gly
>WENV181883847
OGXI01015752
342104
Bacillota
TAC
Val
>WENV181883090
OGXI01001660
342104
Bacillota
TAC
Val
>WENV181883474
OGXI01005320
179755
Bacillota
CCG
Arg
>WENV181883601
OGXI01007345
58120
Bacillota
AAG
Leu
>WENV181883172
OGXI01002240
58120
Bacillota
AAG
Leu
>WENV181884135
OGXI01046731
291650
Bacillota
TGC
Ala
>WENV181883937
OGXI01021656
46835
Bacillota
TAA
Leu
>WENV181883334
OGXI01003804
330413
Bacillota
CTT
Lys
>WENV181883125
OGXI01001862
398832
Bacillota
TTC
Glu
>WENV181883205
OGXI01002575
118669
Bacillota
GTA
Tyr
>WENV181883439
OGXI01004874
332651
Bacillota
GTT
Asn
>WENV181884166
OGXI01050537
201856
Bacillota
GAT
Ile
>WENV181882550
OGXI01000034
280483
Bacillota
GAA
Phe
>WENV181882551
OGXI01000034
285756
Bacillota
GCC
Gly
>WENV181884153
OGXI01049019
398833
Bacillota
TGT
Thr
>WENV181883763
OGXI01011630
175849
Bacillota
GTC
Asp
>WENV181883412
OGXI01004667
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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