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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
91 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181905234
OGXY01000003
510477
Bacillota
TCC
Gly
>WENV181905351
OGXY01000067
404076
Bacillota
GCC
Gly
>WENV181905432
OGXY01000200
404076
Bacillota
GCC
Gly
>WENV181906146
OGXY01019590
280500
Bacillota
TGC
Ala
>WENV181905349
OGXY01000067
184504
Bacillota
GTC
Asp
>WENV181905596
OGXY01000721
289472
Bacillota
TTC
Glu
>WENV181906052
OGXY01010288
280428
Bacillota
GAA
Phe
>WENV181905410
OGXY01000148
424998
Bacillota
GCC
Gly
>WENV181905530
OGXY01000454
284746
Bacillota
CTG
Gln
>WENV181905609
OGXY01000797
183994
Bacillota
TCT
Arg
>WENV181905720
OGXY01001665
280492
Bacillota
CTT
Lys
>WENV181905475
OGXY01000313
231532
Bacillota
ACG
Arg
>WENV181905384
OGXY01000101
291629
Bacillota
CCA
Trp
>WENV181905360
OGXY01000071
101000
Bacillota
GTA
Tyr
>WENV181905641
OGXY01000996
215243
Bacillota
CAT
Met
>WENV181905441
OGXY01000212
404079
Bacillota
CAT
Met
>WENV181905948
OGXY01006162
190476
Bacillota
CAT
Met
>WENV181905358
OGXY01000071
184522
Bacillota
CCT
Arg
>WENV181905829
OGXY01003255
280447
Bacillota
GAC
Val
>WENV181905439
OGXY01000210
47207
Bacillota
TGA
Ser
>WENV181905337
OGXY01000054
312274
Bacillota
GGC
Ala
>WENV181905606
OGXY01000790
359682
Bacillota
TAC
Val
>WENV181905597
OGXY01000721
359682
Bacillota
TAC
Val
>WENV181905895
OGXY01004463
73009
Bacillota
CAG
Leu
>WENV181905363
OGXY01000071
183993
Bacillota
CAT
Met
>WENV181906207
OGXY01028681
291581
Bacillota
CGG
Pro
>WENV181905923
OGXY01005124
175859
Bacillota
TCT
Arg
>WENV181905762
OGXY01002348
398835
Bacillota
GCC
Gly
>WENV181905362
OGXY01000071
289149
Bacillota
GGT
Thr
>WENV181905786
OGXY01002621
175831
Bacillota
ACG
Arg
>WENV181905379
OGXY01000090
332181
Bacillota
TGT
Thr
>WENV181905409
OGXY01000147
47166
Bacillota
CGA
Ser
>WENV181906208
OGXY01028787
510876
Bacillota
GGT
Thr
>WENV181906173
OGXY01023138
284627
Bacillota
GAA
Phe
>WENV181905593
OGXY01000721
289147
Bacillota
GTT
Asn
>WENV181905365
OGXY01000075
289475
Bacillota
GTG
His
>WENV181905804
OGXY01002815
241041
Bacillota
CGG
Pro
>WENV181905802
OGXY01002815
241041
Bacillota
CGG
Pro
>WENV181905312
OGXY01000039
183957
Bacillota
CCT
Arg
>WENV181905424
OGXY01000178
346451
Bacillota
TTT
Lys
>WENV181906143
OGXY01018725
295350
Bacillota
TGC
Ala
>WENV181905958
OGXY01006224
137739
Bacillota
TAG
Leu
>WENV181905265
OGXY01000019
293309
Bacillota
GTT
Asn
>WENV181905364
OGXY01000075
20913
Bacillota
GCT
Ser
>WENV181905799
OGXY01002773
480322
Bacillota
CTG
Gln
>WENV181905850
OGXY01003533
187364
Bacillota
CAT
Met
>WENV181905650
OGXY01001072
175868
Bacillota
GTT
Asn
>WENV181905607
OGXY01000797
200900
Bacillota
TGG
Pro
>WENV181905437
OGXY01000210
184455
Bacillota
GTC
Asp
>WENV181905489
OGXY01000349
289476
Bacillota
CGT
Thr
>WENV181905412
OGXY01000148
48832
Bacillota
TAA
Leu
>WENV181905970
OGXY01006505
398854
Bacillota
CTC
Glu
>WENV181905897
OGXY01004612
480324
Bacillota
TTG
Gln
>WENV181906195
OGXY01027013
497729
Bacillota
CCA
Trp
>WENV181905985
OGXY01007363
303718
Bacillota
TGT
Thr
>WENV181905882
OGXY01004141
303718
Bacillota
TGT
Thr
>WENV181905989
OGXY01007557
73638
Bacillota
AAG
Leu
>WENV181905652
OGXY01001084
56079
Bacillota
AAG
Leu
>WENV181906141
OGXY01018059
292374
Bacillota
TGC
Ala
>WENV181905594
OGXY01000721
403952
Bacillota
CTG
Gln
>WENV181905604
OGXY01000790
179935
Bacillota
GTC
Asp
>WENV181906232
OGXY01036229
186051
Bacillota
GAT
Ile
>WENV181905755
OGXY01002286
398857
Bacillota
TTC
Glu
>WENV181905598
OGXY01000723
117745
Bacillota
GTA
Tyr
>WENV181905790
OGXY01002668
280444
Bacillota
GGT
Thr
>WENV181905946
OGXY01006085
46643
Bacillota
TGA
Ser
>WENV181905438
OGXY01000210
100999
Bacillota
GAG
Leu
>WENV181905661
OGXY01001188
321753
Bacillota
GCC
Gly
>WENV181905595
OGXY01000721
289745
Bacillota
TTT
Lys
>WENV181906185
OGXY01024912
179755
Bacillota
CCG
Arg
>WENV181905274
OGXY01000019
401111
Bacillota
TTC
Glu
>WENV181905477
OGXY01000317
289154
Bacillota
CTT
Lys
>WENV181905570
OGXY01000619
46835
Bacillota
TAA
Leu
>WENV181905605
OGXY01000790
284742
Bacillota
GAA
Phe
>WENV181905949
OGXY01006162
398832
Bacillota
TTC
Glu
>WENV181906065
OGXY01010899
25955
Bacillota
GCT
Ser
>WENV181905699
OGXY01001439
280462
Bacillota
GAA
Phe
>WENV181905904
OGXY01004811
398852
Bacillota
CTC
Glu
>WENV181905676
OGXY01001270
398852
Bacillota
CTC
Glu
>WENV181905610
OGXY01000797
404085
Bacillota
CCG
Arg
>WENV181906140
OGXY01018059
201856
Bacillota
GAT
Ile
>WENV181905592
OGXY01000718
183995
Bacillota
GGG
Pro
>WENV181905276
OGXY01000022
184523
Bacillota
GAC
Val
>WENV181906105
OGXY01014362
398833
Bacillota
TGT
Thr
>WENV181905366
OGXY01000075
403766
Bacillota
TTG
Gln
>WENV181905411
OGXY01000148
489283
Bacillota
GCA
Cys
>WENV181906244
OGXY01038575
280486
Bacillota
TGC
Ala
>WENV181905255
OGXY01000012
405393
Bacillota
GCC
Gly
>WENV181905992
OGXY01007782
56074
Bacillota
TGA
Ser
>WENV181905696
OGXY01001397
482078
Bacillota
CCC
Gly
>WENV181905916
OGXY01005034
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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