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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
71 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182166171
OHMP01001203
510477
Bacillota
TCC
Gly
>WENV182166026
OHMP01000272
349107
Bacillota
GCC
Gly
>WENV182166067
OHMP01000465
183994
Bacillota
TCT
Arg
>WENV182165979
OHMP01000156
231532
Bacillota
ACG
Arg
>WENV182165935
OHMP01000071
175842
Bacillota
CAC
Val
>WENV182166220
OHMP01001983
291629
Bacillota
CCA
Trp
>WENV182166535
OHMP01023335
184497
Bacillota
GGG
Pro
>WENV182166513
OHMP01021236
179176
Bacillota
ACG
Arg
>WENV182166148
OHMP01001020
101000
Bacillota
GTA
Tyr
>WENV182166007
OHMP01000210
190476
Bacillota
CAT
Met
>WENV182166055
OHMP01000405
184522
Bacillota
CCT
Arg
>WENV182166281
OHMP01003371
179251
Bacillota
CAT
Met
>WENV182166614
OHMP01041321
73664
Bacillota
CAG
Leu
>WENV182166078
OHMP01000529
280447
Bacillota
GAC
Val
>WENV182166013
OHMP01000239
5692
Bacillota
GCT
Ser
>WENV182166043
OHMP01000354
47207
Bacillota
TGA
Ser
>WENV182166228
OHMP01002075
312274
Bacillota
GGC
Ala
>WENV182166330
OHMP01005659
284723
Bacillota
TAC
Val
>WENV182166102
OHMP01000646
73009
Bacillota
CAG
Leu
>WENV182166635
OHMP01051785
481217
Bacillota
GCA
Cys
>WENV182166612
OHMP01040630
280708
Bacillota
TAC
Val
>WENV182166177
OHMP01001235
189473
Bacillota
GAT
Ile
>WENV182166151
OHMP01001020
183993
Bacillota
CAT
Met
>WENV182166238
OHMP01002312
407726
Bacillota
CTG
Gln
>WENV182166237
OHMP01002312
407726
Bacillota
CTG
Gln
>WENV182166046
OHMP01000367
291581
Bacillota
CGG
Pro
>WENV182166004
OHMP01000208
175859
Bacillota
TCT
Arg
>WENV182166150
OHMP01001020
289149
Bacillota
GGT
Thr
>WENV182166180
OHMP01001260
175831
Bacillota
ACG
Arg
>WENV182166398
OHMP01008834
353153
Bacillota
TGC
Ala
>WENV182166184
OHMP01001313
332181
Bacillota
TGT
Thr
>WENV182165993
OHMP01000191
47166
Bacillota
CGA
Ser
>WENV182166425
OHMP01011242
289475
Bacillota
GTG
His
>WENV182166292
OHMP01003523
291634
Bacillota
GAA
Phe
>WENV182166071
OHMP01000482
241041
Bacillota
CGG
Pro
>WENV182166342
OHMP01006442
295350
Bacillota
TGC
Ala
>WENV182166526
OHMP01022545
179706
Bacillota
CAT
Met
>WENV182166045
OHMP01000367
480322
Bacillota
CTG
Gln
>WENV182165928
OHMP01000059
480322
Bacillota
CTG
Gln
>WENV182166437
OHMP01011956
187364
Bacillota
CAT
Met
>WENV182166152
OHMP01001021
175868
Bacillota
GTT
Asn
>WENV182166095
OHMP01000614
175868
Bacillota
GTT
Asn
>WENV182166065
OHMP01000465
200900
Bacillota
TGG
Pro
>WENV182166168
OHMP01001158
184455
Bacillota
GTC
Asp
>WENV182166178
OHMP01001255
289476
Bacillota
CGT
Thr
>WENV182166192
OHMP01001381
48832
Bacillota
TAA
Leu
>WENV182166094
OHMP01000614
398854
Bacillota
CTC
Glu
>WENV182166101
OHMP01000626
291576
Bacillota
CCC
Gly
>WENV182166451
OHMP01013555
497729
Bacillota
CCA
Trp
>WENV182166321
OHMP01005019
303718
Bacillota
TGT
Thr
>WENV182166497
OHMP01017657
292374
Bacillota
TGC
Ala
>WENV182166278
OHMP01003371
400600
Bacillota
TTG
Gln
>WENV182166470
OHMP01015198
398857
Bacillota
TTC
Glu
>WENV182166114
OHMP01000693
280444
Bacillota
GGT
Thr
>WENV182166111
OHMP01000693
280444
Bacillota
GGT
Thr
>WENV182166169
OHMP01001158
100999
Bacillota
GAG
Leu
>WENV182166072
OHMP01000482
15649
Bacillota
GGA
Ser
>WENV182166021
OHMP01000266
179755
Bacillota
CCG
Arg
>WENV182166070
OHMP01000481
289154
Bacillota
CTT
Lys
>WENV182166008
OHMP01000210
398832
Bacillota
TTC
Glu
>WENV182166573
OHMP01031153
283367
Bacillota
GCC
Gly
>WENV182166068
OHMP01000465
404085
Bacillota
CCG
Arg
>WENV182166496
OHMP01017657
201856
Bacillota
GAT
Ile
>WENV182166175
OHMP01001227
183995
Bacillota
GGG
Pro
>WENV182166140
OHMP01000989
184523
Bacillota
GAC
Val
>WENV182166183
OHMP01001298
184523
Bacillota
GAC
Val
>WENV182166022
OHMP01000266
398833
Bacillota
TGT
Thr
>WENV182166426
OHMP01011242
403766
Bacillota
TTG
Gln
>WENV182166113
OHMP01000693
175849
Bacillota
GTC
Asp
>WENV182166093
OHMP01000606
280486
Bacillota
TGC
Ala
>WENV182166134
OHMP01000895
405393
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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