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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182292664
OHWB01002355
510477
Bacillota
TCC
Gly
>WENV182293018
OHWB01030640
280500
Bacillota
TGC
Ala
>WENV182292950
OHWB01020555
405363
Bacillota
GCA
Cys
>WENV182292608
OHWB01001068
289472
Bacillota
TTC
Glu
>WENV182292604
OHWB01001068
424998
Bacillota
GCC
Gly
>WENV182292855
OHWB01012351
179917
Bacillota
CAT
Met
>WENV182292829
OHWB01011073
280492
Bacillota
CTT
Lys
>WENV182293011
OHWB01029671
179176
Bacillota
ACG
Arg
>WENV182293063
OHWB01040038
184687
Bacillota
CAT
Met
>WENV182292792
OHWB01009157
101000
Bacillota
GTA
Tyr
>WENV182292620
OHWB01001357
184522
Bacillota
CCT
Arg
>WENV182292979
OHWB01023538
5692
Bacillota
GCT
Ser
>WENV182292699
OHWB01004256
47207
Bacillota
TGA
Ser
>WENV182292735
OHWB01006013
186123
Bacillota
GTC
Asp
>WENV182292609
OHWB01001068
359682
Bacillota
TAC
Val
>WENV182292989
OHWB01025634
73009
Bacillota
CAG
Leu
>WENV182292676
OHWB01002919
481217
Bacillota
GCA
Cys
>WENV182292951
OHWB01020682
280646
Bacillota
TGC
Ala
>WENV182292795
OHWB01009157
183993
Bacillota
CAT
Met
>WENV182292891
OHWB01014755
175859
Bacillota
TCT
Arg
>WENV182292794
OHWB01009157
289149
Bacillota
GGT
Thr
>WENV182292731
OHWB01005679
175831
Bacillota
ACG
Arg
>WENV182292454
OHWB01000013
179810
Bacillota
TCT
Arg
>WENV182292605
OHWB01001068
289147
Bacillota
GTT
Asn
>WENV182292736
OHWB01006013
291634
Bacillota
GAA
Phe
>WENV182293071
OHWB01042183
241041
Bacillota
CGG
Pro
>WENV182292686
OHWB01003701
20913
Bacillota
GCT
Ser
>WENV182292672
OHWB01002713
27216
Bacillota
GCT
Ser
>WENV182292943
OHWB01019534
480322
Bacillota
CTG
Gln
>WENV182292456
OHWB01000013
401685
Bacillota
TTG
Gln
>WENV182292858
OHWB01012513
184455
Bacillota
GTC
Asp
>WENV182292680
OHWB01003060
289476
Bacillota
CGT
Thr
>WENV182292684
OHWB01003529
48832
Bacillota
TAA
Leu
>WENV182293029
OHWB01033778
480324
Bacillota
TTG
Gln
>WENV182292712
OHWB01004551
303718
Bacillota
TGT
Thr
>WENV182292887
OHWB01014367
56079
Bacillota
AAG
Leu
>WENV182292606
OHWB01001068
403952
Bacillota
CTG
Gln
>WENV182293023
OHWB01030951
204381
Bacillota
GAT
Ile
>WENV182292994
OHWB01026478
117745
Bacillota
GTA
Tyr
>WENV182292896
OHWB01014931
280444
Bacillota
GGT
Thr
>WENV182292861
OHWB01012724
291597
Bacillota
TGC
Ala
>WENV182292954
OHWB01021036
15649
Bacillota
GGA
Ser
>WENV182292607
OHWB01001068
289745
Bacillota
TTT
Lys
>WENV182292733
OHWB01005883
289154
Bacillota
CTT
Lys
>WENV182292906
OHWB01015747
398832
Bacillota
TTC
Glu
>WENV182293049
OHWB01037183
398852
Bacillota
CTC
Glu
>WENV182292853
OHWB01012351
118359
Bacillota
GTA
Tyr
>WENV182292652
OHWB01001848
289123
Bacillota
GGT
Thr
>WENV182292953
OHWB01020848
183995
Bacillota
GGG
Pro
>WENV182292455
OHWB01000013
175857
Bacillota
GTG
His
>WENV182292683
OHWB01003529
489283
Bacillota
GCA
Cys
>WENV182292796
OHWB01009249
405393
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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