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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182394802
OIEJ01001575
57121
Bacillota
GGA
Ser
>WENV182394647
OIEJ01000141
184537
Bacillota
ACG
Arg
>WENV182394567
OIEJ01000057
408526
Bacillota
GCA
Cys
>WENV182394617
OIEJ01000098
296855
Bacillota
GGT
Thr
>WENV182394642
OIEJ01000134
400904
Bacillota
CCT
Arg
>WENV182394599
OIEJ01000086
48505
Bacillota
TGA
Ser
>WENV182394664
OIEJ01000183
13634
Bacillota
CGA
Ser
>WENV182394700
OIEJ01000390
289717
Bacillota
CTT
Lys
>WENV182394701
OIEJ01000410
179563
Bacillota
GAT
Ile
>WENV182394828
OIEJ01003260
179563
Bacillota
GAT
Ile
>WENV182394640
OIEJ01000132
20932
Bacillota
GCT
Ser
>WENV182394554
OIEJ01000048
482593
Bacillota
CCC
Gly
>WENV182394847
OIEJ01005305
339995
Bacillota
TGC
Ala
>WENV182394611
OIEJ01000095
20942
Bacillota
GGA
Ser
>WENV182394618
OIEJ01000098
184495
Bacillota
CAT
Met
>WENV182394595
OIEJ01000079
141202
Bacillota
CAA
Leu
>WENV182394614
OIEJ01000098
289713
Bacillota
TGT
Thr
>WENV182394679
OIEJ01000261
404091
Bacillota
TTG
Gln
>WENV182394677
OIEJ01000257
284389
Bacillota
CTT
Lys
>WENV182394678
OIEJ01000261
289716
Bacillota
GTG
His
>WENV182394706
OIEJ01000412
508151
Bacillota
GGT
Thr
>WENV182394549
OIEJ01000045
480337
Bacillota
TCC
Gly
>WENV182394648
OIEJ01000141
119459
Bacillota
TAG
Leu
>WENV182394621
OIEJ01000099
280547
Bacillota
GTC
Asp
>WENV182394619
OIEJ01000098
445407
Bacillota
GCC
Gly
>WENV182394566
OIEJ01000057
445407
Bacillota
GCC
Gly
>WENV182394680
OIEJ01000261
289761
Bacillota
TTT
Lys
>WENV182394663
OIEJ01000183
74725
Bacillota
CAG
Leu
>WENV182394707
OIEJ01000418
284390
Bacillota
CGT
Thr
>WENV182394662
OIEJ01000179
289715
Bacillota
TAC
Val
>WENV182394833
OIEJ01003523
289715
Bacillota
TAC
Val
>WENV182394551
OIEJ01000045
20943
Bacillota
CGA
Ser
>WENV182394548
OIEJ01000045
208539
Bacillota
TGG
Pro
>WENV182394550
OIEJ01000045
184539
Bacillota
TCT
Arg
>WENV182394773
OIEJ01001063
432249
Bacillota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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