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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182412089
OIFS01000028
201994
Gammaproteobacteria
TCT
Arg
>WENV182412201
OIFS01000132
4116
Gammaproteobacteria
GCT
Ser
>WENV182412187
OIFS01000104
229315
Gammaproteobacteria
GGG
Pro
>WENV182412070
OIFS01000022
404084
Gammaproteobacteria
CTG
Gln
>WENV182412033
OIFS01000003
121754
Gammaproteobacteria
TAG
Leu
>WENV182412095
OIFS01000029
29456
Gammaproteobacteria
CGA
Ser
>WENV182412065
OIFS01000022
185104
Gammaproteobacteria
CAT
Met
>WENV182412069
OIFS01000022
185104
Gammaproteobacteria
CAT
Met
>WENV182412071
OIFS01000022
481247
Gammaproteobacteria
CTG
Gln
>WENV182412132
OIFS01000055
494289
Gammaproteobacteria
CCA
Trp
>WENV182412211
OIFS01000161
282604
Gammaproteobacteria
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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