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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182546526
OJBP01000073
73123
Gammaproteobacteria
CAA
Leu
>WENV182546788
OJBP01003221
196766
Gammaproteobacteria
GTT
Asn
>WENV182546831
OJBP01005681
183804
Gammaproteobacteria
CAT
Met
>WENV182546675
OJBP01000986
281275
Gammaproteobacteria
TGT
Thr
>WENV182546600
OJBP01000394
20273
Gammaproteobacteria
TGA
Ser
>WENV182546532
OJBP01000093
176662
Gammaproteobacteria
ACG
Arg
>WENV182546872
OJBP01012427
29834
Gammaproteobacteria
GCT
Ser
>WENV182546731
OJBP01001705
140925
Gammaproteobacteria
GTA
Tyr
>WENV182546676
OJBP01000986
140925
Gammaproteobacteria
GTA
Tyr
>WENV182546569
OJBP01000219
229289
Gammaproteobacteria
TGG
Pro
>WENV182546525
OJBP01000073
281282
Gammaproteobacteria
TTC
Glu
>WENV182546540
OJBP01000118
329164
Gammaproteobacteria
TTT
Lys
>WENV182546507
OJBP01000038
176663
Gammaproteobacteria
GGG
Pro
>WENV182546610
OJBP01000434
313852
Gammaproteobacteria
TTC
Glu
>WENV182546816
OJBP01004730
283966
Gammaproteobacteria
CCT
Arg
>WENV182546480
OJBP01000021
351236
Gammaproteobacteria
TTT
Lys
>WENV182546473
OJBP01000009
351236
Gammaproteobacteria
TTT
Lys
>WENV182546538
OJBP01000114
480516
Gammaproteobacteria
GCA
Cys
>WENV182546739
OJBP01001784
338424
Gammaproteobacteria
TAC
Val
>WENV182546868
OJBP01010770
291402
Gammaproteobacteria
GTG
His
>WENV182546721
OJBP01001507
280812
Gammaproteobacteria
GAA
Phe
>WENV182546869
OJBP01010770
130635
Gammaproteobacteria
TAG
Leu
>WENV182546479
OJBP01000019
176661
Gammaproteobacteria
GAC
Val
>WENV182546883
OJBP01020182
178169
Gammaproteobacteria
GAC
Val
>WENV182546511
OJBP01000043
306288
Gammaproteobacteria
GCC
Gly
>WENV182546519
OJBP01000060
176664
Gammaproteobacteria
CCT
Arg
>WENV182546485
OJBP01000023
346373
Gammaproteobacteria
GAA
Phe
>WENV182546589
OJBP01000316
346373
Gammaproteobacteria
GAA
Phe
>WENV182546837
OJBP01007212
176544
Gammaproteobacteria
CAT
Met
>WENV182546802
OJBP01004148
118414
Gammaproteobacteria
TAG
Leu
>WENV182546857
OJBP01009234
176301
Gammaproteobacteria
GAT
Ile
>WENV182546599
OJBP01000381
56623
Gammaproteobacteria
GGA
Ser
>WENV182546529
OJBP01000083
56623
Gammaproteobacteria
GGA
Ser
>WENV182546761
OJBP01002249
236619
Gammaproteobacteria
GTC
Asp
>WENV182546521
OJBP01000064
176665
Gammaproteobacteria
CGG
Pro
>WENV182546798
OJBP01003816
402799
Gammaproteobacteria
TTG
Gln
>WENV182546862
OJBP01010273
296680
Gammaproteobacteria
GTT
Asn
>WENV182546571
OJBP01000219
281283
Gammaproteobacteria
GTG
His
>WENV182546715
OJBP01001466
281939
Gammaproteobacteria
TTT
Lys
>WENV182546778
OJBP01002754
141076
Gammaproteobacteria
GTA
Tyr
>WENV182546730
OJBP01001705
282902
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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