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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182555364
OJDA01000080
180052
Gammaproteobacteria
CCT
Arg
>WENV182555421
OJDA01000321
363863
Gammaproteobacteria
CCA
Trp
>WENV182555496
OJDA01008084
73123
Gammaproteobacteria
CAA
Leu
>WENV182555481
OJDA01004584
281275
Gammaproteobacteria
TGT
Thr
>WENV182555348
OJDA01000046
281276
Gammaproteobacteria
GGT
Thr
>WENV182555418
OJDA01000267
180053
Gammaproteobacteria
CAT
Met
>WENV182555489
OJDA01005234
176662
Gammaproteobacteria
ACG
Arg
>WENV182555311
OJDA01000007
73863
Gammaproteobacteria
CAG
Leu
>WENV182555425
OJDA01000348
140925
Gammaproteobacteria
GTA
Tyr
>WENV182555494
OJDA01007098
281282
Gammaproteobacteria
TTC
Glu
>WENV182555480
OJDA01004544
329164
Gammaproteobacteria
TTT
Lys
>WENV182555317
OJDA01000012
351236
Gammaproteobacteria
TTT
Lys
>WENV182555404
OJDA01000174
480516
Gammaproteobacteria
GCA
Cys
>WENV182555482
OJDA01004584
126555
Gammaproteobacteria
GTA
Tyr
>WENV182555446
OJDA01000930
243308
Gammaproteobacteria
TGG
Pro
>WENV182555312
OJDA01000007
280812
Gammaproteobacteria
GAA
Phe
>WENV182555403
OJDA01000174
306288
Gammaproteobacteria
GCC
Gly
>WENV182555388
OJDA01000134
287558
Gammaproteobacteria
TTC
Glu
>WENV182555483
OJDA01004604
176664
Gammaproteobacteria
CCT
Arg
>WENV182555454
OJDA01001095
176301
Gammaproteobacteria
GAT
Ile
>WENV182555402
OJDA01000168
56623
Gammaproteobacteria
GGA
Ser
>WENV182555448
OJDA01000930
281283
Gammaproteobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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