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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182581207
OJGX01000826
170858
Bacteroidota
TGG
Pro
>WENV182581628
OJGX01023344
184111
Bacteroidota
GGG
Pro
>WENV182581576
OJGX01014867
120026
Bacteroidota
GTA
Tyr
>WENV182581390
OJGX01004419
156605
Bacteroidota
GAC
Val
>WENV182581474
OJGX01008445
156605
Bacteroidota
GAC
Val
>WENV182581577
OJGX01014867
281336
Bacteroidota
TCC
Gly
>WENV182581502
OJGX01010303
402090
Bacteroidota
TTG
Gln
>WENV182581569
OJGX01014473
216338
Bacteroidota
GTG
His
>WENV182581660
OJGX01031598
155786
Bacteroidota
TGG
Pro
>WENV182581208
OJGX01000826
176812
Bacteroidota
TCT
Arg
>WENV182581565
OJGX01013624
366169
Bacteroidota
GAA
Phe
>WENV182581659
OJGX01031598
74253
Bacteroidota
GCT
Ser
>WENV182581497
OJGX01009777
197494
Bacteroidota
GTC
Asp
>WENV182581312
OJGX01002731
399285
Bacteroidota
TTC
Glu
>WENV182581254
OJGX01001537
227539
Bacteroidota
GTT
Asn
>WENV182581212
OJGX01000887
178527
Bacteroidota
CAT
Met
>WENV182581465
OJGX01008035
21872
Bacteroidota
GGA
Ser
>WENV182581623
OJGX01022696
200516
Bacteroidota
CAT
Met
>WENV182581507
OJGX01010658
402343
Bacteroidota
CCA
Trp
>WENV182581563
OJGX01013564
372845
Bacteroidota
CCA
Trp
>WENV182581352
OJGX01003616
197245
Bacteroidota
TCT
Arg
>WENV182581548
OJGX01012466
118418
Bacteroidota
TAG
Leu
>WENV182581695
OJGX01044245
356164
Bacteroidota
TCC
Gly
>WENV182581591
OJGX01016558
403841
Bacteroidota
GCC
Gly
>WENV182581592
OJGX01016558
74739
Bacteroidota
TAA
Leu
>WENV182581611
OJGX01020108
361792
Bacteroidota
GAA
Phe
>WENV182581236
OJGX01001230
62756
Bacteroidota
TGA
Ser
>WENV182581402
OJGX01005131
156340
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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