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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182584033
OJHF01004312
176796
Gammaproteobacteria
GGG
Pro
>WENV182583911
OJHF01000598
191061
Gammaproteobacteria
ACG
Arg
>WENV182583866
OJHF01000203
353123
Gammaproteobacteria
CCA
Trp
>WENV182584027
OJHF01004158
185999
Gammaproteobacteria
CCG
Arg
>WENV182584086
OJHF01007518
311084
Gammaproteobacteria
GCC
Gly
>WENV182584087
OJHF01007518
480629
Gammaproteobacteria
GCA
Cys
>WENV182583963
OJHF01001746
181365
Gammaproteobacteria
CAT
Met
>WENV182583932
OJHF01001074
335783
Gammaproteobacteria
GTT
Asn
>WENV182583989
OJHF01002549
176301
Gammaproteobacteria
GAT
Ile
>WENV182584164
OJHF01017025
230011
Gammaproteobacteria
ACG
Arg
>WENV182583927
OJHF01000872
340790
Gammaproteobacteria
TGT
Thr
>WENV182583890
OJHF01000425
201377
Gammaproteobacteria
TGG
Pro
>WENV182584231
OJHF01029444
349758
Gammaproteobacteria
GGC
Ala
>WENV182583847
OJHF01000112
181277
Gammaproteobacteria
ACG
Arg
>WENV182583870
OJHF01000252
282018
Gammaproteobacteria
TGT
Thr
>WENV182583962
OJHF01001730
281939
Gammaproteobacteria
TTT
Lys
>WENV182584155
OJHF01015949
282902
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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