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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182628502
OJKQ01012379
176499
Actinomycetota
CAT
Met
>WENV182628202
OJKQ01003534
280498
Actinomycetota
GTT
Asn
>WENV182628203
OJKQ01003534
280498
Actinomycetota
GTT
Asn
>WENV182628475
OJKQ01011083
280498
Actinomycetota
GTT
Asn
>WENV182627913
OJKQ01000987
140768
Actinomycetota
TAG
Leu
>WENV182628575
OJKQ01016001
56384
Actinomycetota
TGA
Ser
>WENV182628327
OJKQ01005747
482604
Actinomycetota
TTG
Gln
>WENV182628559
OJKQ01014933
59689
Actinomycetota
GGA
Ser
>WENV182628085
OJKQ01002238
175837
Actinomycetota
ACG
Arg
>WENV182628794
OJKQ01046250
187349
Actinomycetota
TGG
Pro
>WENV182628160
OJKQ01003094
280441
Actinomycetota
CCG
Arg
>WENV182628747
OJKQ01036709
280702
Actinomycetota
GGC
Ala
>WENV182628676
OJKQ01025469
302133
Actinomycetota
CAC
Val
>WENV182628320
OJKQ01005604
176638
Actinomycetota
GGG
Pro
>WENV182628578
OJKQ01016230
280524
Actinomycetota
TGC
Ala
>WENV182627758
OJKQ01000347
280524
Actinomycetota
TGC
Ala
>WENV182627759
OJKQ01000347
280523
Actinomycetota
GGC
Ala
>WENV182627938
OJKQ01001110
175841
Actinomycetota
TAT
Ile
>WENV182628683
OJKQ01026674
179229
Actinomycetota
GTC
Asp
>WENV182628648
OJKQ01022248
175872
Actinomycetota
GTC
Asp
>WENV182628044
OJKQ01001843
175872
Actinomycetota
GTC
Asp
>WENV182627911
OJKQ01000985
20205
Actinomycetota
GCT
Ser
>WENV182627861
OJKQ01000734
280450
Actinomycetota
TTT
Lys
>WENV182628757
OJKQ01038175
480329
Actinomycetota
CCC
Gly
>WENV182628002
OJKQ01001490
480329
Actinomycetota
CCC
Gly
>WENV182628592
OJKQ01018306
483206
Actinomycetota
CTG
Gln
>WENV182628023
OJKQ01001658
175882
Actinomycetota
TGG
Pro
>WENV182628498
OJKQ01012117
20209
Actinomycetota
GAG
Leu
>WENV182628254
OJKQ01004516
280489
Actinomycetota
CTC
Glu
>WENV182628192
OJKQ01003316
280499
Actinomycetota
CCT
Arg
>WENV182628255
OJKQ01004516
398853
Actinomycetota
CTG
Gln
>WENV182628765
OJKQ01040278
175843
Actinomycetota
CAA
Leu
>WENV182628600
OJKQ01018951
175843
Actinomycetota
CAA
Leu
>WENV182628464
OJKQ01010451
175843
Actinomycetota
CAA
Leu
>WENV182628247
OJKQ01004250
175843
Actinomycetota
CAA
Leu
>WENV182628158
OJKQ01003070
203883
Actinomycetota
TCT
Arg
>WENV182628156
OJKQ01003026
46642
Actinomycetota
CGA
Ser
>WENV182627809
OJKQ01000497
104211
Actinomycetota
CAG
Leu
>WENV182628694
OJKQ01027758
178568
Actinomycetota
ACG
Arg
>WENV182628603
OJKQ01019377
289788
Actinomycetota
CTC
Glu
>WENV182628501
OJKQ01012379
117903
Actinomycetota
GTA
Tyr
>WENV182627936
OJKQ01001109
56071
Actinomycetota
TGA
Ser
>WENV182628086
OJKQ01002242
147796
Actinomycetota
TAA
Leu
>WENV182627912
OJKQ01000987
280470
Actinomycetota
CGT
Thr
>WENV182628060
OJKQ01002015
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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