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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182861995
OKPJ01000055
57121
Bacillota
GGA
Ser
>WENV182862015
OKPJ01000103
184537
Bacillota
ACG
Arg
>WENV182861951
OKPJ01000009
408526
Bacillota
GCA
Cys
>WENV182862122
OKPJ01008953
282753
Bacillota
TAC
Val
>WENV182862125
OKPJ01008953
282753
Bacillota
TAC
Val
>WENV182862120
OKPJ01008953
176678
Bacillota
GTC
Asp
>WENV182862123
OKPJ01008953
176678
Bacillota
GTC
Asp
>WENV182862058
OKPJ01000271
296855
Bacillota
GGT
Thr
>WENV182861947
OKPJ01000007
48505
Bacillota
TGA
Ser
>WENV182862022
OKPJ01000120
13634
Bacillota
CGA
Ser
>WENV182861980
OKPJ01000034
289717
Bacillota
CTT
Lys
>WENV182862127
OKPJ01009247
20360
Bacillota
TGA
Ser
>WENV182862044
OKPJ01000185
179563
Bacillota
GAT
Ile
>WENV182862111
OKPJ01006459
282752
Bacillota
TTT
Lys
>WENV182862112
OKPJ01006459
282752
Bacillota
TTT
Lys
>WENV182862050
OKPJ01000231
20932
Bacillota
GCT
Ser
>WENV182861949
OKPJ01000009
291553
Bacillota
GAA
Phe
>WENV182861963
OKPJ01000016
482593
Bacillota
CCC
Gly
>WENV182862100
OKPJ01004386
339995
Bacillota
TGC
Ala
>WENV182861998
OKPJ01000059
20942
Bacillota
GGA
Ser
>WENV182862094
OKPJ01003639
280871
Bacillota
GAA
Phe
>WENV182862095
OKPJ01003639
400112
Bacillota
GCC
Gly
>WENV182862114
OKPJ01006459
400112
Bacillota
GCC
Gly
>WENV182862059
OKPJ01000271
184495
Bacillota
CAT
Met
>WENV182861972
OKPJ01000026
141202
Bacillota
CAA
Leu
>WENV182862036
OKPJ01000185
179130
Bacillota
ACG
Arg
>WENV182862079
OKPJ01001290
29614
Bacillota
GGA
Ser
>WENV182862107
OKPJ01006444
282756
Bacillota
CTT
Lys
>WENV182862119
OKPJ01008428
100098
Bacillota
GAG
Leu
>WENV182862055
OKPJ01000271
289713
Bacillota
TGT
Thr
>WENV182862065
OKPJ01000373
404091
Bacillota
TTG
Gln
>WENV182861981
OKPJ01000035
284389
Bacillota
CTT
Lys
>WENV182862064
OKPJ01000373
289716
Bacillota
GTG
His
>WENV182862128
OKPJ01009247
20361
Bacillota
GCT
Ser
>WENV182861991
OKPJ01000046
480337
Bacillota
TCC
Gly
>WENV182862016
OKPJ01000103
119459
Bacillota
TAG
Leu
>WENV182862109
OKPJ01006459
282757
Bacillota
GTG
His
>WENV182862035
OKPJ01000185
51970
Bacillota
TAA
Leu
>WENV182861948
OKPJ01000009
280547
Bacillota
GTC
Asp
>WENV182861950
OKPJ01000009
445407
Bacillota
GCC
Gly
>WENV182862066
OKPJ01000373
289761
Bacillota
TTT
Lys
>WENV182862108
OKPJ01006459
176771
Bacillota
TCT
Arg
>WENV182862047
OKPJ01000211
284390
Bacillota
CGT
Thr
>WENV182862124
OKPJ01008953
449573
Bacillota
>WENV182862121
OKPJ01008953
449573
Bacillota
>WENV182862051
OKPJ01000235
282755
Bacillota
GGT
Thr
>WENV182861993
OKPJ01000046
20943
Bacillota
CGA
Ser
>WENV182862027
OKPJ01000133
480366
Bacillota
GGT
Thr
>WENV182861990
OKPJ01000046
208539
Bacillota
TGG
Pro
>WENV182861992
OKPJ01000046
184539
Bacillota
TCT
Arg
>WENV182862110
OKPJ01006459
400113
Bacillota
TTG
Gln
>WENV182862090
OKPJ01003551
318172
Bacillota
CCA
Trp
>WENV182862091
OKPJ01003551
318172
Bacillota
CCA
Trp
>WENV182862105
OKPJ01006047
282751
Bacillota
TGC
Ala
>WENV182861985
OKPJ01000038
432249
Bacillota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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