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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
103 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182884997
OKSC01001900
99852
Bacillota
GTA
Tyr
>WENV182885526
OKSC01009665
405363
Bacillota
GCA
Cys
>WENV182885418
OKSC01006773
290391
Bacillota
TAC
Val
>WENV182885444
OKSC01007088
280428
Bacillota
GAA
Phe
>WENV182885520
OKSC01009219
291579
Bacillota
GAA
Phe
>WENV182884277
OKSC01000132
179917
Bacillota
CAT
Met
>WENV182885203
OKSC01003537
184114
Bacillota
GTG
His
>WENV182884278
OKSC01000132
302145
Bacillota
GAA
Phe
>WENV182885442
OKSC01007088
280466
Bacillota
TAC
Val
>WENV182885855
OKSC01032909
300936
Bacillota
TGC
Ala
>WENV182884673
OKSC01000651
280492
Bacillota
CTT
Lys
>WENV182884134
OKSC01000037
280492
Bacillota
CTT
Lys
>WENV182884958
OKSC01001709
175842
Bacillota
CAC
Val
>WENV182884669
OKSC01000643
175842
Bacillota
CAC
Val
>WENV182885638
OKSC01014558
184497
Bacillota
GGG
Pro
>WENV182884516
OKSC01000407
407852
Bacillota
TTC
Glu
>WENV182885723
OKSC01019964
179563
Bacillota
GAT
Ile
>WENV182885631
OKSC01014324
179176
Bacillota
ACG
Arg
>WENV182884480
OKSC01000373
295166
Bacillota
TGC
Ala
>WENV182886063
OKSC01082968
190476
Bacillota
CAT
Met
>WENV182884080
OKSC01000013
73664
Bacillota
CAG
Leu
>WENV182885277
OKSC01004468
280447
Bacillota
GAC
Val
>WENV182885196
OKSC01003493
5692
Bacillota
GCT
Ser
>WENV182884235
OKSC01000104
186123
Bacillota
GTC
Asp
>WENV182884239
OKSC01000104
186123
Bacillota
GTC
Asp
>WENV182885245
OKSC01003901
284723
Bacillota
TAC
Val
>WENV182885181
OKSC01003416
73009
Bacillota
CAG
Leu
>WENV182885014
OKSC01001989
73009
Bacillota
CAG
Leu
>WENV182884959
OKSC01001723
73009
Bacillota
CAG
Leu
>WENV182884955
OKSC01001690
73009
Bacillota
CAG
Leu
>WENV182884954
OKSC01001690
73009
Bacillota
CAG
Leu
>WENV182885566
OKSC01011582
481217
Bacillota
GCA
Cys
>WENV182884307
OKSC01000156
280708
Bacillota
TAC
Val
>WENV182884321
OKSC01000172
280708
Bacillota
TAC
Val
>WENV182884487
OKSC01000377
407840
Bacillota
TTC
Glu
>WENV182886013
OKSC01069947
291581
Bacillota
CGG
Pro
>WENV182885012
OKSC01001989
175859
Bacillota
TCT
Arg
>WENV182885826
OKSC01029509
21311
Bacillota
GCT
Ser
>WENV182884966
OKSC01001761
175831
Bacillota
ACG
Arg
>WENV182884584
OKSC01000494
179810
Bacillota
TCT
Arg
>WENV182884325
OKSC01000172
284627
Bacillota
GAA
Phe
>WENV182884291
OKSC01000143
284627
Bacillota
GAA
Phe
>WENV182884481
OKSC01000374
294020
Bacillota
TAC
Val
>WENV182885673
OKSC01016468
195824
Bacillota
GAT
Ile
>WENV182884328
OKSC01000174
184121
Bacillota
TGG
Pro
>WENV182884615
OKSC01000567
484885
Bacillota
TCC
Gly
>WENV182885033
OKSC01002116
480322
Bacillota
CTG
Gln
>WENV182885591
OKSC01012634
175868
Bacillota
GTT
Asn
>WENV182885041
OKSC01002191
175868
Bacillota
GTT
Asn
>WENV182885025
OKSC01002079
175868
Bacillota
GTT
Asn
>WENV182885590
OKSC01012634
398854
Bacillota
CTC
Glu
>WENV182885073
OKSC01002413
398854
Bacillota
CTC
Glu
>WENV182885024
OKSC01002079
398854
Bacillota
CTC
Glu
>WENV182884695
OKSC01000713
291576
Bacillota
CCC
Gly
>WENV182884322
OKSC01000172
287280
Bacillota
TGT
Thr
>WENV182885083
OKSC01002542
480324
Bacillota
TTG
Gln
>WENV182885817
OKSC01028631
175899
Bacillota
GTC
Asp
>WENV182885496
OKSC01008911
303718
Bacillota
TGT
Thr
>WENV182885321
OKSC01004831
303718
Bacillota
TGT
Thr
>WENV182884923
OKSC01001549
303718
Bacillota
TGT
Thr
>WENV182884082
OKSC01000015
303718
Bacillota
TGT
Thr
>WENV182885884
OKSC01038609
73638
Bacillota
AAG
Leu
>WENV182884079
OKSC01000013
56079
Bacillota
AAG
Leu
>WENV182884078
OKSC01000013
56079
Bacillota
AAG
Leu
>WENV182885808
OKSC01027661
186051
Bacillota
GAT
Ile
>WENV182884320
OKSC01000171
398857
Bacillota
TTC
Glu
>WENV182885233
OKSC01003825
117745
Bacillota
GTA
Tyr
>WENV182884403
OKSC01000254
117745
Bacillota
GTA
Tyr
>WENV182885435
OKSC01006963
280444
Bacillota
GGT
Thr
>WENV182885265
OKSC01004299
280444
Bacillota
GGT
Thr
>WENV182884693
OKSC01000683
280444
Bacillota
GGT
Thr
>WENV182884690
OKSC01000683
280444
Bacillota
GGT
Thr
>WENV182884132
OKSC01000037
46643
Bacillota
TGA
Ser
>WENV182884319
OKSC01000169
289745
Bacillota
TTT
Lys
>WENV182885524
OKSC01009572
179755
Bacillota
CCG
Arg
>WENV182885410
OKSC01006683
179755
Bacillota
CCG
Arg
>WENV182885958
OKSC01052798
58120
Bacillota
AAG
Leu
>WENV182885570
OKSC01011794
46835
Bacillota
TAA
Leu
>WENV182886064
OKSC01082968
398832
Bacillota
TTC
Glu
>WENV182885235
OKSC01003825
280462
Bacillota
GAA
Phe
>WENV182884295
OKSC01000146
280462
Bacillota
GAA
Phe
>WENV182884843
OKSC01001128
398852
Bacillota
CTC
Glu
>WENV182884172
OKSC01000062
398852
Bacillota
CTC
Glu
>WENV182884138
OKSC01000042
398852
Bacillota
CTC
Glu
>WENV182885494
OKSC01008805
309916
Bacillota
TTT
Lys
>WENV182886044
OKSC01077829
201856
Bacillota
GAT
Ile
>WENV182884425
OKSC01000283
184539
Bacillota
TCT
Arg
>WENV182884466
OKSC01000352
280483
Bacillota
GAA
Phe
>WENV182885851
OKSC01032710
285601
Bacillota
TTC
Glu
>WENV182884204
OKSC01000080
175857
Bacillota
GTG
His
>WENV182884262
OKSC01000117
285756
Bacillota
GCC
Gly
>WENV182885374
OKSC01005791
398833
Bacillota
TGT
Thr
>WENV182885443
OKSC01007088
175849
Bacillota
GTC
Asp
>WENV182885434
OKSC01006963
175849
Bacillota
GTC
Asp
>WENV182884692
OKSC01000683
175849
Bacillota
GTC
Asp
>WENV182885236
OKSC01003825
280463
Bacillota
TTT
Lys
>WENV182884206
OKSC01000080
280463
Bacillota
TTT
Lys
>WENV182885674
OKSC01016468
280486
Bacillota
TGC
Ala
>WENV182884236
OKSC01000104
405393
Bacillota
GCC
Gly
>WENV182884060
OKSC01000006
405393
Bacillota
GCC
Gly
>WENV182885195
OKSC01003493
56074
Bacillota
TGA
Ser
>WENV182885304
OKSC01004609
280473
Bacillota
TGG
Pro
>WENV182884682
OKSC01000666
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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