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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182917854
OKTV01006170
280500
Bacillota
TGC
Ala
>WENV182917850
OKTV01005974
405363
Bacillota
GCA
Cys
>WENV182917899
OKTV01009568
289472
Bacillota
TTC
Glu
>WENV182917848
OKTV01005974
280428
Bacillota
GAA
Phe
>WENV182917873
OKTV01007595
424998
Bacillota
GCC
Gly
>WENV182917863
OKTV01007229
280492
Bacillota
CTT
Lys
>WENV182917921
OKTV01012507
175842
Bacillota
CAC
Val
>WENV182917838
OKTV01004507
5692
Bacillota
GCT
Ser
>WENV182917844
OKTV01005356
189473
Bacillota
GAT
Ile
>WENV182917905
OKTV01010861
175859
Bacillota
TCT
Arg
>WENV182917896
OKTV01009568
289147
Bacillota
GTT
Asn
>WENV182917777
OKTV01001304
175868
Bacillota
GTT
Asn
>WENV182917973
OKTV01019493
200900
Bacillota
TGG
Pro
>WENV182917871
OKTV01007595
184455
Bacillota
GTC
Asp
>WENV182917810
OKTV01002440
322848
Bacillota
CTT
Lys
>WENV182917901
OKTV01010237
48832
Bacillota
TAA
Leu
>WENV182917809
OKTV01002440
398854
Bacillota
CTC
Glu
>WENV182917765
OKTV01000820
292612
Bacillota
TAC
Val
>WENV182917865
OKTV01007432
175899
Bacillota
GTC
Asp
>WENV182917922
OKTV01012819
56079
Bacillota
AAG
Leu
>WENV182917793
OKTV01001817
323864
Bacillota
TGC
Ala
>WENV182917897
OKTV01009568
403952
Bacillota
CTG
Gln
>WENV182917868
OKTV01007432
117745
Bacillota
GTA
Tyr
>WENV182917870
OKTV01007540
280444
Bacillota
GGT
Thr
>WENV182917849
OKTV01005974
321753
Bacillota
GCC
Gly
>WENV182917860
OKTV01006764
15649
Bacillota
GGA
Ser
>WENV182917898
OKTV01009568
289745
Bacillota
TTT
Lys
>WENV182917855
OKTV01006171
179755
Bacillota
CCG
Arg
>WENV182917976
OKTV01020884
398832
Bacillota
TTC
Glu
>WENV182917891
OKTV01009321
184539
Bacillota
TCT
Arg
>WENV182917908
OKTV01011535
183995
Bacillota
GGG
Pro
>WENV182917923
OKTV01012826
175857
Bacillota
GTG
His
>WENV182917933
OKTV01013360
175849
Bacillota
GTC
Asp
>WENV182917879
OKTV01008669
280486
Bacillota
TGC
Ala
>WENV182917794
OKTV01001840
405393
Bacillota
GCC
Gly
>WENV182917837
OKTV01004507
56074
Bacillota
TGA
Ser
>WENV182917900
OKTV01010167
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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