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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182954056
OKWA01000008
201994
Gammaproteobacteria
TCT
Arg
>WENV182954588
OKWA01005752
400513
Gammaproteobacteria
CCT
Arg
>WENV182954509
OKWA01002846
212255
Gammaproteobacteria
ACG
Arg
>WENV182954510
OKWA01002846
212255
Gammaproteobacteria
ACG
Arg
>WENV182954300
OKWA01000326
29726
Gammaproteobacteria
GAG
Leu
>WENV182954414
OKWA01000929
4477
Gammaproteobacteria
>WENV182954630
OKWA01008152
56399
Gammaproteobacteria
GGA
Ser
>WENV182954366
OKWA01000520
73550
Gammaproteobacteria
CAG
Leu
>WENV182954370
OKWA01000531
58793
Gammaproteobacteria
TGA
Ser
>WENV182954406
OKWA01000925
283507
Gammaproteobacteria
CTT
Lys
>WENV182954399
OKWA01000771
37928
Gammaproteobacteria
CGA
Ser
>WENV182954542
OKWA01003696
73551
Gammaproteobacteria
TAA
Leu
>WENV182954646
OKWA01009727
176081
Gammaproteobacteria
>WENV182954481
OKWA01002050
283506
Gammaproteobacteria
TTT
Lys
>WENV182954482
OKWA01002050
283506
Gammaproteobacteria
TTT
Lys
>WENV182954541
OKWA01003696
481095
Gammaproteobacteria
GCA
Cys
>WENV182954373
OKWA01000533
233649
Gammaproteobacteria
TCT
Arg
>WENV182954625
OKWA01007567
118262
Gammaproteobacteria
CAA
Leu
>WENV182954531
OKWA01003338
283508
Gammaproteobacteria
GTT
Asn
>WENV182954609
OKWA01006687
283508
Gammaproteobacteria
GTT
Asn
>WENV182954325
OKWA01000430
285536
Gammaproteobacteria
GGC
Ala
>WENV182954296
OKWA01000307
281352
Gammaproteobacteria
TGT
Thr
>WENV182954461
OKWA01001686
176832
Gammaproteobacteria
TCT
Arg
>WENV182954271
OKWA01000242
179582
Gammaproteobacteria
TCT
Arg
>WENV182954295
OKWA01000307
56398
Gammaproteobacteria
TGA
Ser
>WENV182954372
OKWA01000533
238586
Gammaproteobacteria
TCG
Arg
>WENV182954425
OKWA01001030
178724
Gammaproteobacteria
CAT
Met
>WENV182954451
OKWA01001513
178723
Gammaproteobacteria
GGG
Pro
>WENV182954326
OKWA01000430
283509
Gammaproteobacteria
TAC
Val
>WENV182954709
OKWA01019552
398951
Gammaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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