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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182966181
OKWV01000031
201994
Gammaproteobacteria
TCT
Arg
>WENV182966309
OKWV01000138
4116
Gammaproteobacteria
GCT
Ser
>WENV182966137
OKWV01000017
404084
Gammaproteobacteria
CTG
Gln
>WENV182966101
OKWV01000001
121754
Gammaproteobacteria
TAG
Leu
>WENV182966388
OKWV01004520
184442
Gammaproteobacteria
>WENV182966248
OKWV01000071
29456
Gammaproteobacteria
CGA
Ser
>WENV182966155
OKWV01000023
482476
Gammaproteobacteria
CCA
Trp
>WENV182966332
OKWV01000201
301694
Gammaproteobacteria
TGT
Thr
>WENV182966311
OKWV01000138
184275
Gammaproteobacteria
ACG
Arg
>WENV182966132
OKWV01000017
185104
Gammaproteobacteria
CAT
Met
>WENV182966136
OKWV01000017
185104
Gammaproteobacteria
CAT
Met
>WENV182966271
OKWV01000096
195083
Gammaproteobacteria
ACG
Arg
>WENV182966272
OKWV01000096
195083
Gammaproteobacteria
ACG
Arg
>WENV182966273
OKWV01000096
195083
Gammaproteobacteria
ACG
Arg
>WENV182966343
OKWV01000423
123094
Gammaproteobacteria
GTA
Tyr
>WENV182966203
OKWV01000041
76276
Gammaproteobacteria
TAA
Leu
>WENV182966216
OKWV01000059
76276
Gammaproteobacteria
TAA
Leu
>WENV182966138
OKWV01000017
481247
Gammaproteobacteria
CTG
Gln
>WENV182966100
OKWV01000001
176541
Gammaproteobacteria
CAT
Met
>WENV182966149
OKWV01000021
282604
Gammaproteobacteria
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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