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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183056583
OLHJ01001425
402532
Bacteroidota
GCC
Gly
>WENV183056825
OLHJ01026393
73133
Bacteroidota
TAA
Leu
>WENV183056401
OLHJ01000006
176863
Bacteroidota
CAT
Met
>WENV183056745
OLHJ01010205
402390
Bacteroidota
TTC
Glu
>WENV183056819
OLHJ01025460
120026
Bacteroidota
GTA
Tyr
>WENV183056419
OLHJ01000024
156605
Bacteroidota
GAC
Val
>WENV183056650
OLHJ01003005
281336
Bacteroidota
TCC
Gly
>WENV183056545
OLHJ01000736
402090
Bacteroidota
TTG
Gln
>WENV183056617
OLHJ01002270
402090
Bacteroidota
TTG
Gln
>WENV183056666
OLHJ01003475
281190
Bacteroidota
CAT
Met
>WENV183056738
OLHJ01009293
320084
Bacteroidota
TTT
Lys
>WENV183056833
OLHJ01029000
209351
Bacteroidota
CAT
Met
>WENV183056440
OLHJ01000060
282369
Bacteroidota
TTT
Lys
>WENV183056713
OLHJ01006385
155786
Bacteroidota
TGG
Pro
>WENV183056633
OLHJ01002650
320669
Bacteroidota
GAA
Phe
>WENV183056762
OLHJ01012380
155808
Bacteroidota
TGG
Pro
>WENV183056714
OLHJ01006385
176707
Bacteroidota
TCT
Arg
>WENV183056402
OLHJ01000006
229336
Bacteroidota
GGC
Ala
>WENV183056796
OLHJ01019948
227539
Bacteroidota
GTT
Asn
>WENV183056879
OLHJ01047324
227539
Bacteroidota
GTT
Asn
>WENV183056615
OLHJ01002226
193718
Bacteroidota
GTC
Asp
>WENV183056678
OLHJ01004305
225069
Bacteroidota
TCG
Arg
>WENV183056668
OLHJ01003521
340026
Bacteroidota
CAT
Met
>WENV183056485
OLHJ01000188
206043
Bacteroidota
GTC
Asp
>WENV183056756
OLHJ01011394
197245
Bacteroidota
TCT
Arg
>WENV183056653
OLHJ01003009
118418
Bacteroidota
TAG
Leu
>WENV183056587
OLHJ01001511
118418
Bacteroidota
TAG
Leu
>WENV183056555
OLHJ01000892
118418
Bacteroidota
TAG
Leu
>WENV183056727
OLHJ01008006
200485
Bacteroidota
CAT
Met
>WENV183056669
OLHJ01003643
176699
Bacteroidota
GTT
Asn
>WENV183056414
OLHJ01000015
296664
Bacteroidota
GAA
Phe
>WENV183056605
OLHJ01001973
156424
Bacteroidota
TGG
Pro
>WENV183056486
OLHJ01000191
399343
Bacteroidota
TTC
Glu
>WENV183056602
OLHJ01001839
399343
Bacteroidota
TTC
Glu
>WENV183056510
OLHJ01000311
56162
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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