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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183061181
OLHZ01000672
402532
Bacteroidota
GCC
Gly
>WENV183061286
OLHZ01002720
402532
Bacteroidota
GCC
Gly
>WENV183061480
OLHZ01017788
402532
Bacteroidota
GCC
Gly
>WENV183061486
OLHZ01018575
400818
Bacteroidota
TTC
Glu
>WENV183061182
OLHZ01000672
73133
Bacteroidota
TAA
Leu
>WENV183061555
OLHZ01030647
191838
Bacteroidota
CAT
Met
>WENV183061179
OLHZ01000650
176863
Bacteroidota
CAT
Met
>WENV183061134
OLHZ01000126
402390
Bacteroidota
TTC
Glu
>WENV183061258
OLHZ01002073
402090
Bacteroidota
TTG
Gln
>WENV183061160
OLHZ01000365
23370
Bacteroidota
GGA
Ser
>WENV183061268
OLHZ01002355
281190
Bacteroidota
CAT
Met
>WENV183061242
OLHZ01001750
320084
Bacteroidota
TTT
Lys
>WENV183061296
OLHZ01003024
209351
Bacteroidota
CAT
Met
>WENV183061218
OLHZ01001293
282369
Bacteroidota
TTT
Lys
>WENV183061158
OLHZ01000354
155786
Bacteroidota
TGG
Pro
>WENV183061289
OLHZ01002832
320669
Bacteroidota
GAA
Phe
>WENV183061444
OLHZ01011164
155808
Bacteroidota
TGG
Pro
>WENV183061456
OLHZ01013553
176707
Bacteroidota
TCT
Arg
>WENV183061291
OLHZ01002933
74253
Bacteroidota
GCT
Ser
>WENV183061241
OLHZ01001738
197494
Bacteroidota
GTC
Asp
>WENV183061273
OLHZ01002472
140868
Bacteroidota
GTA
Tyr
>WENV183061215
OLHZ01001278
200516
Bacteroidota
CAT
Met
>WENV183061307
OLHZ01003245
181598
Bacteroidota
GTT
Asn
>WENV183061432
OLHZ01009657
402343
Bacteroidota
CCA
Trp
>WENV183061335
OLHZ01004052
206043
Bacteroidota
GTC
Asp
>WENV183061145
OLHZ01000246
118749
Bacteroidota
GTA
Tyr
>WENV183061293
OLHZ01002933
197245
Bacteroidota
TCT
Arg
>WENV183061357
OLHZ01004600
197245
Bacteroidota
TCT
Arg
>WENV183061417
OLHZ01008514
118418
Bacteroidota
TAG
Leu
>WENV183061156
OLHZ01000332
118418
Bacteroidota
TAG
Leu
>WENV183061135
OLHZ01000162
176817
Bacteroidota
CAT
Met
>WENV183061282
OLHZ01002638
176817
Bacteroidota
CAT
Met
>WENV183061146
OLHZ01000246
289409
Bacteroidota
TCC
Gly
>WENV183061246
OLHZ01001764
289409
Bacteroidota
TCC
Gly
>WENV183061440
OLHZ01010962
296664
Bacteroidota
GAA
Phe
>WENV183061183
OLHZ01000691
296664
Bacteroidota
GAA
Phe
>WENV183061198
OLHZ01000947
481829
Bacteroidota
GCA
Cys
>WENV183061339
OLHZ01004122
156424
Bacteroidota
TGG
Pro
>WENV183061292
OLHZ01002933
156424
Bacteroidota
TGG
Pro
>WENV183061161
OLHZ01000380
399343
Bacteroidota
TTC
Glu
>WENV183061412
OLHZ01007817
399343
Bacteroidota
TTC
Glu
>WENV183061171
OLHZ01000475
56162
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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