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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
118 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183131450
OLOA01043839
416763
Bacillota
CTC
Glu
>WENV183131381
OLOA01033426
140922
Bacillota
GTA
Tyr
>WENV183131069
OLOA01012851
343590
Bacillota
GCC
Gly
>WENV183130186
OLOA01001070
349107
Bacillota
GCC
Gly
>WENV183131498
OLOA01052524
480520
Bacillota
TCC
Gly
>WENV183131229
OLOA01021325
405363
Bacillota
GCA
Cys
>WENV183130414
OLOA01002035
290391
Bacillota
TAC
Val
>WENV183130745
OLOA01004920
280428
Bacillota
GAA
Phe
>WENV183130090
OLOA01000746
356660
Bacillota
CTT
Lys
>WENV183130332
OLOA01001608
179917
Bacillota
CAT
Met
>WENV183131018
OLOA01010364
176678
Bacillota
GTC
Asp
>WENV183130333
OLOA01001608
302145
Bacillota
GAA
Phe
>WENV183130975
OLOA01009307
179261
Bacillota
CGG
Pro
>WENV183131310
OLOA01027104
280492
Bacillota
CTT
Lys
>WENV183131371
OLOA01032773
175842
Bacillota
CAC
Val
>WENV183130786
OLOA01005389
348419
Bacillota
GTT
Asn
>WENV183130014
OLOA01000584
348419
Bacillota
GTT
Asn
>WENV183129758
OLOA01000177
348419
Bacillota
GTT
Asn
>WENV183129757
OLOA01000177
348419
Bacillota
GTT
Asn
>WENV183130298
OLOA01001485
184497
Bacillota
GGG
Pro
>WENV183129891
OLOA01000361
184497
Bacillota
GGG
Pro
>WENV183130515
OLOA01002645
400752
Bacillota
GTT
Asn
>WENV183131277
OLOA01024625
179563
Bacillota
GAT
Ile
>WENV183130240
OLOA01001237
179176
Bacillota
ACG
Arg
>WENV183130100
OLOA01000787
179176
Bacillota
ACG
Arg
>WENV183129864
OLOA01000323
141334
Bacillota
TAG
Leu
>WENV183131382
OLOA01033426
481151
Bacillota
CCA
Trp
>WENV183129609
OLOA01000057
73664
Bacillota
CAG
Leu
>WENV183131186
OLOA01018985
5692
Bacillota
GCT
Ser
>WENV183131324
OLOA01028205
186123
Bacillota
GTC
Asp
>WENV183131578
OLOA01070062
175825
Bacillota
GAT
Ile
>WENV183130919
OLOA01008073
73009
Bacillota
CAG
Leu
>WENV183130210
OLOA01001120
481217
Bacillota
GCA
Cys
>WENV183130208
OLOA01001120
481217
Bacillota
GCA
Cys
>WENV183131361
OLOA01031863
280646
Bacillota
TGC
Ala
>WENV183131298
OLOA01026877
281417
Bacillota
GTC
Asp
>WENV183131518
OLOA01057174
189473
Bacillota
GAT
Ile
>WENV183131436
OLOA01041858
189473
Bacillota
GAT
Ile
>WENV183131260
OLOA01023255
407840
Bacillota
TTC
Glu
>WENV183130781
OLOA01005298
407726
Bacillota
CTG
Gln
>WENV183130581
OLOA01003193
448284
Bacillota
CTC
Glu
>WENV183131357
OLOA01031646
291581
Bacillota
CGG
Pro
>WENV183130660
OLOA01003900
175859
Bacillota
TCT
Arg
>WENV183131577
OLOA01070062
280436
Bacillota
TGC
Ala
>WENV183129861
OLOA01000323
330433
Bacillota
GTG
His
>WENV183131419
OLOA01040119
175831
Bacillota
ACG
Arg
>WENV183131276
OLOA01024625
353153
Bacillota
TGC
Ala
>WENV183130968
OLOA01009263
455259
Bacillota
TTC
Glu
>WENV183131076
OLOA01013112
481244
Bacillota
CCC
Gly
>WENV183131383
OLOA01033426
284111
Bacillota
GTG
His
>WENV183131258
OLOA01023168
284627
Bacillota
GAA
Phe
>WENV183131380
OLOA01033426
284110
Bacillota
GAA
Phe
>WENV183130855
OLOA01006561
284107
Bacillota
CGC
Ala
>WENV183130854
OLOA01006547
282730
Bacillota
TAC
Val
>WENV183130912
OLOA01007752
179263
Bacillota
TCT
Arg
>WENV183131198
OLOA01019638
27216
Bacillota
GCT
Ser
>WENV183130504
OLOA01002573
27216
Bacillota
GCT
Ser
>WENV183131701
OLOA01119948
484885
Bacillota
TCC
Gly
>WENV183130764
OLOA01005079
484885
Bacillota
TCC
Gly
>WENV183131356
OLOA01031646
480322
Bacillota
CTG
Gln
>WENV183131152
OLOA01017289
187364
Bacillota
CAT
Met
>WENV183131301
OLOA01026877
282867
Bacillota
TGT
Thr
>WENV183131337
OLOA01029919
175868
Bacillota
GTT
Asn
>WENV183130805
OLOA01005600
328982
Bacillota
CGT
Thr
>WENV183129485
OLOA01000011
24344
Bacillota
GCT
Ser
>WENV183131098
OLOA01014159
291576
Bacillota
CCC
Gly
>WENV183130852
OLOA01006547
284105
Bacillota
GTT
Asn
>WENV183131340
OLOA01030232
480324
Bacillota
TTG
Gln
>WENV183131115
OLOA01014763
497729
Bacillota
CCA
Trp
>WENV183130176
OLOA01001056
497729
Bacillota
CCA
Trp
>WENV183130350
OLOA01001713
73685
Bacillota
CAA
Leu
>WENV183131299
OLOA01026877
178143
Bacillota
TTC
Glu
>WENV183130312
OLOA01001535
303718
Bacillota
TGT
Thr
>WENV183131005
OLOA01009969
73638
Bacillota
AAG
Leu
>WENV183131257
OLOA01023110
323864
Bacillota
TGC
Ala
>WENV183130857
OLOA01006587
398857
Bacillota
TTC
Glu
>WENV183131570
OLOA01067006
204381
Bacillota
GAT
Ile
>WENV183131194
OLOA01019517
280444
Bacillota
GGT
Thr
>WENV183130561
OLOA01003047
400626
Bacillota
CCG
Arg
>WENV183129863
OLOA01000323
354380
Bacillota
TTT
Lys
>WENV183129854
OLOA01000323
342104
Bacillota
TAC
Val
>WENV183131127
OLOA01015735
179755
Bacillota
CCG
Arg
>WENV183130722
OLOA01004670
46845
Bacillota
AAG
Leu
>WENV183130674
OLOA01004043
58120
Bacillota
AAG
Leu
>WENV183130062
OLOA01000676
58120
Bacillota
AAG
Leu
>WENV183130972
OLOA01009307
284112
Bacillota
TTT
Lys
>WENV183131078
OLOA01013142
344985
Bacillota
GAA
Phe
>WENV183130856
OLOA01006561
330490
Bacillota
GGC
Ala
>WENV183130444
OLOA01002138
46835
Bacillota
TAA
Leu
>WENV183131286
OLOA01025740
330413
Bacillota
CTT
Lys
>WENV183130887
OLOA01007176
330413
Bacillota
CTT
Lys
>WENV183130865
OLOA01006642
398832
Bacillota
TTC
Glu
>WENV183130185
OLOA01001067
25955
Bacillota
GCT
Ser
>WENV183129860
OLOA01000323
203851
Bacillota
TCT
Arg
>WENV183131677
OLOA01108790
449573
Bacillota
>WENV183131016
OLOA01010364
449573
Bacillota
>WENV183131554
OLOA01062569
118669
Bacillota
GTA
Tyr
>WENV183130701
OLOA01004335
52748
Bacillota
TGA
Ser
>WENV183131335
OLOA01029396
282755
Bacillota
GGT
Thr
>WENV183129840
OLOA01000279
280476
Bacillota
TTT
Lys
>WENV183130803
OLOA01005600
332651
Bacillota
GTT
Asn
>WENV183129496
OLOA01000013
398852
Bacillota
CTC
Glu
>WENV183129495
OLOA01000013
398852
Bacillota
CTC
Glu
>WENV183131320
OLOA01027822
201856
Bacillota
GAT
Ile
>WENV183129946
OLOA01000464
444984
Bacillota
GCC
Gly
>WENV183130542
OLOA01002877
74100
Bacillota
CAG
Leu
>WENV183129682
OLOA01000103
280483
Bacillota
GAA
Phe
>WENV183130853
OLOA01006547
8644
Bacillota
GGA
Ser
>WENV183131179
OLOA01018613
285601
Bacillota
TTC
Glu
>WENV183130464
OLOA01002271
285601
Bacillota
TTC
Glu
>WENV183130415
OLOA01002035
285756
Bacillota
GCC
Gly
>WENV183129683
OLOA01000103
285756
Bacillota
GCC
Gly
>WENV183129858
OLOA01000323
141617
Bacillota
TAG
Leu
>WENV183131448
OLOA01043738
398833
Bacillota
TGT
Thr
>WENV183131193
OLOA01019517
175849
Bacillota
GTC
Asp
>WENV183130582
OLOA01003193
481173
Bacillota
CTG
Gln
>WENV183131185
OLOA01018985
56074
Bacillota
TGA
Ser
>WENV183131074
OLOA01013041
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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