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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
108 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183171514
OLPC01000254
179231
Actinomycetota
TAC
Val
>WENV183171267
OLPC01000012
176499
Actinomycetota
CAT
Met
>WENV183171313
OLPC01000031
176499
Actinomycetota
CAT
Met
>WENV183172348
OLPC01007976
175883
Actinomycetota
GAT
Ile
>WENV183172350
OLPC01007976
175883
Actinomycetota
GAT
Ile
>WENV183172535
OLPC01018135
175883
Actinomycetota
GAT
Ile
>WENV183171406
OLPC01000100
175907
Actinomycetota
TAC
Val
>WENV183172220
OLPC01005182
285746
Actinomycetota
GGC
Ala
>WENV183171615
OLPC01000510
14009
Actinomycetota
GGA
Ser
>WENV183171237
OLPC01000006
280498
Actinomycetota
GTT
Asn
>WENV183171236
OLPC01000006
280498
Actinomycetota
GTT
Asn
>WENV183171218
OLPC01000001
280498
Actinomycetota
GTT
Asn
>WENV183171217
OLPC01000001
280498
Actinomycetota
GTT
Asn
>WENV183171210
OLPC01000001
280498
Actinomycetota
GTT
Asn
>WENV183172363
OLPC01008336
280503
Actinomycetota
CCT
Arg
>WENV183171238
OLPC01000006
295964
Actinomycetota
GTT
Asn
>WENV183171284
OLPC01000018
56083
Actinomycetota
CGA
Ser
>WENV183171641
OLPC01000578
140768
Actinomycetota
TAG
Leu
>WENV183171442
OLPC01000171
140768
Actinomycetota
TAG
Leu
>WENV183171242
OLPC01000006
284087
Actinomycetota
CAC
Val
>WENV183171372
OLPC01000075
176075
Actinomycetota
TCT
Arg
>WENV183171955
OLPC01002283
176075
Actinomycetota
TCT
Arg
>WENV183171315
OLPC01000031
176639
Actinomycetota
CGG
Pro
>WENV183171774
OLPC01001058
176078
Actinomycetota
GGG
Pro
>WENV183171332
OLPC01000050
20208
Actinomycetota
GAG
Leu
>WENV183171670
OLPC01000639
482604
Actinomycetota
TTG
Gln
>WENV183171666
OLPC01000632
175837
Actinomycetota
ACG
Arg
>WENV183171665
OLPC01000632
175837
Actinomycetota
ACG
Arg
>WENV183171345
OLPC01000057
175837
Actinomycetota
ACG
Arg
>WENV183171344
OLPC01000057
175837
Actinomycetota
ACG
Arg
>WENV183171317
OLPC01000031
46681
Actinomycetota
CGA
Ser
>WENV183172480
OLPC01013675
180826
Actinomycetota
GGG
Pro
>WENV183171283
OLPC01000018
29393
Actinomycetota
GCT
Ser
>WENV183171292
OLPC01000019
280549
Actinomycetota
CAC
Val
>WENV183171552
OLPC01000376
176641
Actinomycetota
CTT
Lys
>WENV183171322
OLPC01000037
280441
Actinomycetota
CCG
Arg
>WENV183171289
OLPC01000019
280441
Actinomycetota
CCG
Arg
>WENV183171671
OLPC01000639
280702
Actinomycetota
GGC
Ala
>WENV183171916
OLPC01001912
176500
Actinomycetota
CAT
Met
>WENV183171884
OLPC01001741
176077
Actinomycetota
CAT
Met
>WENV183171431
OLPC01000161
117881
Actinomycetota
TAG
Leu
>WENV183171933
OLPC01002082
281241
Actinomycetota
CCG
Arg
>WENV183171316
OLPC01000031
56152
Actinomycetota
TGA
Ser
>WENV183171244
OLPC01000006
176638
Actinomycetota
GGG
Pro
>WENV183171215
OLPC01000001
176638
Actinomycetota
GGG
Pro
>WENV183172243
OLPC01005694
484283
Actinomycetota
CTG
Gln
>WENV183171288
OLPC01000019
184564
Actinomycetota
CTT
Lys
>WENV183171588
OLPC01000458
280524
Actinomycetota
TGC
Ala
>WENV183171539
OLPC01000336
280524
Actinomycetota
TGC
Ala
>WENV183171516
OLPC01000257
280524
Actinomycetota
TGC
Ala
>WENV183171485
OLPC01000213
481719
Actinomycetota
GCA
Cys
>WENV183171279
OLPC01000018
398948
Actinomycetota
TTC
Glu
>WENV183172224
OLPC01005259
291585
Actinomycetota
GCC
Gly
>WENV183171333
OLPC01000051
281239
Actinomycetota
TTT
Lys
>WENV183171319
OLPC01000036
150272
Actinomycetota
TAA
Leu
>WENV183171312
OLPC01000031
117777
Actinomycetota
>WENV183171281
OLPC01000018
117777
Actinomycetota
>WENV183171540
OLPC01000336
280523
Actinomycetota
GGC
Ala
>WENV183171235
OLPC01000006
280523
Actinomycetota
GGC
Ala
>WENV183171209
OLPC01000001
280523
Actinomycetota
GGC
Ala
>WENV183171282
OLPC01000018
175949
Actinomycetota
CAT
Met
>WENV183171420
OLPC01000147
175841
Actinomycetota
TAT
Ile
>WENV183171573
OLPC01000429
280544
Actinomycetota
GTG
His
>WENV183172581
OLPC01022707
280536
Actinomycetota
CTT
Lys
>WENV183171642
OLPC01000578
280496
Actinomycetota
CGT
Thr
>WENV183171700
OLPC01000728
175872
Actinomycetota
GTC
Asp
>WENV183171260
OLPC01000012
175872
Actinomycetota
GTC
Asp
>WENV183171780
OLPC01001075
280703
Actinomycetota
CCT
Arg
>WENV183171396
OLPC01000091
56153
Actinomycetota
GGA
Ser
>WENV183171314
OLPC01000031
20205
Actinomycetota
GCT
Ser
>WENV183171263
OLPC01000012
20205
Actinomycetota
GCT
Ser
>WENV183171672
OLPC01000639
184157
Actinomycetota
TGG
Pro
>WENV183172126
OLPC01003823
175926
Actinomycetota
CAT
Met
>WENV183171343
OLPC01000056
280450
Actinomycetota
TTT
Lys
>WENV183171287
OLPC01000019
280450
Actinomycetota
TTT
Lys
>WENV183171705
OLPC01000763
480329
Actinomycetota
CCC
Gly
>WENV183172302
OLPC01006881
483206
Actinomycetota
CTG
Gln
>WENV183171349
OLPC01000059
175882
Actinomycetota
TGG
Pro
>WENV183171523
OLPC01000281
175882
Actinomycetota
TGG
Pro
>WENV183171966
OLPC01002370
20209
Actinomycetota
GAG
Leu
>WENV183171216
OLPC01000001
20209
Actinomycetota
GAG
Leu
>WENV183171269
OLPC01000014
281240
Actinomycetota
CCT
Arg
>WENV183171580
OLPC01000444
99916
Actinomycetota
CAG
Leu
>WENV183172130
OLPC01003865
99865
Actinomycetota
CAG
Leu
>WENV183171654
OLPC01000614
99865
Actinomycetota
CAG
Leu
>WENV183172036
OLPC01002969
283352
Actinomycetota
GCC
Gly
>WENV183171219
OLPC01000001
480319
Actinomycetota
TTG
Gln
>WENV183171234
OLPC01000006
480319
Actinomycetota
TTG
Gln
>WENV183171439
OLPC01000171
280489
Actinomycetota
CTC
Glu
>WENV183171528
OLPC01000298
280499
Actinomycetota
CCT
Arg
>WENV183171947
OLPC01002207
398853
Actinomycetota
CTG
Gln
>WENV183171584
OLPC01000454
398853
Actinomycetota
CTG
Gln
>WENV183171440
OLPC01000171
398853
Actinomycetota
CTG
Gln
>WENV183171522
OLPC01000281
176642
Actinomycetota
CAA
Leu
>WENV183171348
OLPC01000059
175843
Actinomycetota
CAA
Leu
>WENV183171320
OLPC01000036
175843
Actinomycetota
CAA
Leu
>WENV183171285
OLPC01000018
56075
Actinomycetota
TGA
Ser
>WENV183171667
OLPC01000634
150276
Actinomycetota
TAA
Leu
>WENV183171262
OLPC01000012
46642
Actinomycetota
CGA
Ser
>WENV183171266
OLPC01000012
117903
Actinomycetota
GTA
Tyr
>WENV183171268
OLPC01000012
56071
Actinomycetota
TGA
Ser
>WENV183171587
OLPC01000458
179238
Actinomycetota
GAT
Ile
>WENV183171347
OLPC01000059
147796
Actinomycetota
TAA
Leu
>WENV183171640
OLPC01000578
280470
Actinomycetota
CGT
Thr
>WENV183171441
OLPC01000171
280470
Actinomycetota
CGT
Thr
>WENV183171430
OLPC01000161
280470
Actinomycetota
CGT
Thr
>WENV183171722
OLPC01000824
480376
Actinomycetota
CCC
Gly
>WENV183171455
OLPC01000188
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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