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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
77 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183208974
OLQB01010149
99852
Bacillota
GTA
Tyr
>WENV183208434
OLQB01001243
343590
Bacillota
GCC
Gly
>WENV183209415
OLQB01053044
280500
Bacillota
TGC
Ala
>WENV183208376
OLQB01000958
349107
Bacillota
GCC
Gly
>WENV183209540
OLQB01077919
480520
Bacillota
TCC
Gly
>WENV183209061
OLQB01014341
405363
Bacillota
GCA
Cys
>WENV183208319
OLQB01000639
290391
Bacillota
TAC
Val
>WENV183208375
OLQB01000958
280428
Bacillota
GAA
Phe
>WENV183207999
OLQB01000026
179917
Bacillota
CAT
Met
>WENV183208000
OLQB01000026
302145
Bacillota
GAA
Phe
>WENV183209566
OLQB01087443
175842
Bacillota
CAC
Val
>WENV183209153
OLQB01020351
184497
Bacillota
GGG
Pro
>WENV183208661
OLQB01003332
184497
Bacillota
GGG
Pro
>WENV183209388
OLQB01048389
179563
Bacillota
GAT
Ile
>WENV183209538
OLQB01077919
141334
Bacillota
TAG
Leu
>WENV183208315
OLQB01000628
190476
Bacillota
CAT
Met
>WENV183208280
OLQB01000525
190476
Bacillota
CAT
Met
>WENV183208149
OLQB01000205
73664
Bacillota
CAG
Leu
>WENV183208957
OLQB01009615
280447
Bacillota
GAC
Val
>WENV183208703
OLQB01003807
280447
Bacillota
GAC
Val
>WENV183208959
OLQB01009646
5692
Bacillota
GCT
Ser
>WENV183208845
OLQB01005990
5692
Bacillota
GCT
Ser
>WENV183208258
OLQB01000457
73009
Bacillota
CAG
Leu
>WENV183208986
OLQB01010871
481217
Bacillota
GCA
Cys
>WENV183208586
OLQB01002270
291581
Bacillota
CGG
Pro
>WENV183208492
OLQB01001588
175859
Bacillota
TCT
Arg
>WENV183209542
OLQB01077919
330433
Bacillota
GTG
His
>WENV183208557
OLQB01002039
175831
Bacillota
ACG
Arg
>WENV183209387
OLQB01048389
353153
Bacillota
TGC
Ala
>WENV183208248
OLQB01000435
179810
Bacillota
TCT
Arg
>WENV183209311
OLQB01036458
229413
Bacillota
CAT
Met
>WENV183209146
OLQB01019583
27216
Bacillota
GCT
Ser
>WENV183208943
OLQB01008850
480322
Bacillota
CTG
Gln
>WENV183208644
OLQB01003087
480322
Bacillota
CTG
Gln
>WENV183208585
OLQB01002270
480322
Bacillota
CTG
Gln
>WENV183209183
OLQB01022141
187364
Bacillota
CAT
Met
>WENV183209005
OLQB01011860
175868
Bacillota
GTT
Asn
>WENV183208512
OLQB01001701
291576
Bacillota
CCC
Gly
>WENV183208764
OLQB01004734
480324
Bacillota
TTG
Gln
>WENV183208688
OLQB01003555
480324
Bacillota
TTG
Gln
>WENV183209184
OLQB01022325
508151
Bacillota
GGT
Thr
>WENV183208404
OLQB01001084
497729
Bacillota
CCA
Trp
>WENV183208631
OLQB01002887
303718
Bacillota
TGT
Thr
>WENV183208329
OLQB01000677
303718
Bacillota
TGT
Thr
>WENV183209188
OLQB01022875
56079
Bacillota
AAG
Leu
>WENV183209365
OLQB01044878
323864
Bacillota
TGC
Ala
>WENV183209084
OLQB01015662
398857
Bacillota
TTC
Glu
>WENV183209181
OLQB01021876
204381
Bacillota
GAT
Ile
>WENV183209471
OLQB01062367
117745
Bacillota
GTA
Tyr
>WENV183208812
OLQB01005332
280444
Bacillota
GGT
Thr
>WENV183208778
OLQB01004897
280444
Bacillota
GGT
Thr
>WENV183208447
OLQB01001344
317482
Bacillota
TAC
Val
>WENV183208324
OLQB01000654
483485
Bacillota
CCC
Gly
>WENV183209537
OLQB01077919
354380
Bacillota
TTT
Lys
>WENV183208829
OLQB01005646
223045
Bacillota
GAT
Ile
>WENV183209355
OLQB01042702
179755
Bacillota
CCG
Arg
>WENV183208519
OLQB01001781
330413
Bacillota
CTT
Lys
>WENV183208316
OLQB01000628
398832
Bacillota
TTC
Glu
>WENV183208281
OLQB01000525
398832
Bacillota
TTC
Glu
>WENV183208129
OLQB01000169
398832
Bacillota
TTC
Glu
>WENV183209541
OLQB01077919
203851
Bacillota
TCT
Arg
>WENV183208295
OLQB01000570
118669
Bacillota
GTA
Tyr
>WENV183208140
OLQB01000193
118669
Bacillota
GTA
Tyr
>WENV183209612
OLQB01104231
52748
Bacillota
TGA
Ser
>WENV183207974
OLQB01000012
398852
Bacillota
CTC
Glu
>WENV183207973
OLQB01000012
398852
Bacillota
CTC
Glu
>WENV183207972
OLQB01000012
398852
Bacillota
CTC
Glu
>WENV183209512
OLQB01070267
280483
Bacillota
GAA
Phe
>WENV183208249
OLQB01000435
175857
Bacillota
GTG
His
>WENV183208322
OLQB01000639
285756
Bacillota
GCC
Gly
>WENV183208984
OLQB01010572
398833
Bacillota
TGT
Thr
>WENV183209558
OLQB01085733
285556
Bacillota
TGT
Thr
>WENV183208811
OLQB01005332
175849
Bacillota
GTC
Asp
>WENV183208958
OLQB01009646
56074
Bacillota
TGA
Ser
>WENV183208844
OLQB01005990
56074
Bacillota
TGA
Ser
>WENV183208745
OLQB01004301
280473
Bacillota
TGG
Pro
>WENV183208327
OLQB01000668
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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