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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183425714
OMBL01000046
302145
Bacillota
GAA
Phe
>WENV183425678
OMBL01000013
280492
Bacillota
CTT
Lys
>WENV183425995
OMBL01001230
175842
Bacillota
CAC
Val
>WENV183426375
OMBL01013149
179176
Bacillota
ACG
Arg
>WENV183426053
OMBL01002003
190476
Bacillota
CAT
Met
>WENV183425660
OMBL01000003
73664
Bacillota
CAG
Leu
>WENV183426266
OMBL01008012
280447
Bacillota
GAC
Val
>WENV183426424
OMBL01015297
5692
Bacillota
GCT
Ser
>WENV183425992
OMBL01001203
5692
Bacillota
GCT
Ser
>WENV183426313
OMBL01009970
175825
Bacillota
GAT
Ile
>WENV183426410
OMBL01014534
348194
Bacillota
CCA
Trp
>WENV183426425
OMBL01015306
100696
Bacillota
GTA
Tyr
>WENV183425818
OMBL01000292
73009
Bacillota
CAG
Leu
>WENV183426338
OMBL01011216
187458
Bacillota
CAT
Met
>WENV183426499
OMBL01023766
189473
Bacillota
GAT
Ile
>WENV183426035
OMBL01001826
291581
Bacillota
CGG
Pro
>WENV183425960
OMBL01000899
175859
Bacillota
TCT
Arg
>WENV183426312
OMBL01009970
280436
Bacillota
TGC
Ala
>WENV183425913
OMBL01000636
175831
Bacillota
ACG
Arg
>WENV183425943
OMBL01000788
284627
Bacillota
GAA
Phe
>WENV183426601
OMBL01046453
291634
Bacillota
GAA
Phe
>WENV183426259
OMBL01007620
346451
Bacillota
TTT
Lys
>WENV183426412
OMBL01014534
179706
Bacillota
CAT
Met
>WENV183426034
OMBL01001826
480322
Bacillota
CTG
Gln
>WENV183426077
OMBL01002302
175868
Bacillota
GTT
Asn
>WENV183426492
OMBL01023274
314834
Bacillota
TGC
Ala
>WENV183425760
OMBL01000122
398854
Bacillota
CTC
Glu
>WENV183426533
OMBL01030903
291576
Bacillota
CCC
Gly
>WENV183425971
OMBL01001023
480324
Bacillota
TTG
Gln
>WENV183425862
OMBL01000421
497729
Bacillota
CCA
Trp
>WENV183426480
OMBL01021610
175899
Bacillota
GTC
Asp
>WENV183426152
OMBL01004383
303718
Bacillota
TGT
Thr
>WENV183425659
OMBL01000003
56079
Bacillota
AAG
Leu
>WENV183425658
OMBL01000003
56079
Bacillota
AAG
Leu
>WENV183426326
OMBL01010521
323864
Bacillota
TGC
Ala
>WENV183426447
OMBL01017496
404126
Bacillota
GCC
Gly
>WENV183426446
OMBL01017496
404126
Bacillota
GCC
Gly
>WENV183425737
OMBL01000064
117745
Bacillota
GTA
Tyr
>WENV183426016
OMBL01001511
280444
Bacillota
GGT
Thr
>WENV183426378
OMBL01013197
317482
Bacillota
TAC
Val
>WENV183425785
OMBL01000187
46643
Bacillota
TGA
Ser
>WENV183426140
OMBL01004025
179755
Bacillota
CCG
Arg
>WENV183426054
OMBL01002003
398832
Bacillota
TTC
Glu
>WENV183425762
OMBL01000127
280462
Bacillota
GAA
Phe
>WENV183425821
OMBL01000306
398852
Bacillota
CTC
Glu
>WENV183425748
OMBL01000086
398852
Bacillota
CTC
Glu
>WENV183425694
OMBL01000022
398852
Bacillota
CTC
Glu
>WENV183425899
OMBL01000547
280483
Bacillota
GAA
Phe
>WENV183425900
OMBL01000547
285756
Bacillota
GCC
Gly
>WENV183426273
OMBL01008212
398833
Bacillota
TGT
Thr
>WENV183426509
OMBL01026689
516671
Bacillota
TCC
Gly
>WENV183426015
OMBL01001511
175849
Bacillota
GTC
Asp
>WENV183425763
OMBL01000127
280463
Bacillota
TTT
Lys
>WENV183426423
OMBL01015297
56074
Bacillota
TGA
Ser
>WENV183425991
OMBL01001203
56074
Bacillota
TGA
Ser
>WENV183426293
OMBL01008830
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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