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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183434786
OMCA01000006
280428
Bacillota
GAA
Phe
>WENV183435497
OMCA01013285
291579
Bacillota
GAA
Phe
>WENV183435491
OMCA01013113
280466
Bacillota
TAC
Val
>WENV183435257
OMCA01003885
175842
Bacillota
CAC
Val
>WENV183435272
OMCA01004195
184497
Bacillota
GGG
Pro
>WENV183435456
OMCA01010742
407852
Bacillota
TTC
Glu
>WENV183435459
OMCA01010854
179563
Bacillota
GAT
Ile
>WENV183435084
OMCA01001312
179176
Bacillota
ACG
Arg
>WENV183435405
OMCA01008281
295166
Bacillota
TGC
Ala
>WENV183435275
OMCA01004392
190476
Bacillota
CAT
Met
>WENV183435439
OMCA01009944
280447
Bacillota
GAC
Val
>WENV183435593
OMCA01022923
5692
Bacillota
GCT
Ser
>WENV183435681
OMCA01034800
175825
Bacillota
GAT
Ile
>WENV183434784
OMCA01000006
280427
Bacillota
TAC
Val
>WENV183435626
OMCA01026350
291581
Bacillota
CGG
Pro
>WENV183435756
OMCA01057962
175859
Bacillota
TCT
Arg
>WENV183435680
OMCA01034800
280436
Bacillota
TGC
Ala
>WENV183435562
OMCA01019039
175831
Bacillota
ACG
Arg
>WENV183435265
OMCA01004090
179810
Bacillota
TCT
Arg
>WENV183435632
OMCA01026549
195824
Bacillota
GAT
Ile
>WENV183435625
OMCA01026350
480322
Bacillota
CTG
Gln
>WENV183435421
OMCA01009330
291576
Bacillota
CCC
Gly
>WENV183435601
OMCA01023517
480324
Bacillota
TTG
Gln
>WENV183435752
OMCA01056198
407858
Bacillota
GCC
Gly
>WENV183435107
OMCA01001641
303718
Bacillota
TGT
Thr
>WENV183435489
OMCA01012923
280444
Bacillota
GGT
Thr
>WENV183435057
OMCA01001020
179755
Bacillota
CCG
Arg
>WENV183435354
OMCA01006747
58120
Bacillota
AAG
Leu
>WENV183435213
OMCA01003089
46835
Bacillota
TAA
Leu
>WENV183435276
OMCA01004392
398832
Bacillota
TTC
Glu
>WENV183435216
OMCA01003137
398852
Bacillota
CTC
Glu
>WENV183435027
OMCA01000705
309916
Bacillota
TTT
Lys
>WENV183435498
OMCA01013285
309916
Bacillota
TTT
Lys
>WENV183435606
OMCA01023857
398833
Bacillota
TGT
Thr
>WENV183435667
OMCA01032879
280486
Bacillota
TGC
Ala
>WENV183435592
OMCA01022923
56074
Bacillota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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