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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183614818
OOEA01002152
296698
Alphaproteobacteria
CGC
Ala
>WENV183615089
OOEA01053258
400930
Alphaproteobacteria
GAA
Phe
>WENV183614897
OOEA01007725
178369
Alphaproteobacteria
CGG
Pro
>WENV183615120
OOEA01062804
140876
Alphaproteobacteria
>WENV183614914
OOEA01010860
193463
Alphaproteobacteria
CCT
Arg
>WENV183614844
OOEA01003504
178725
Alphaproteobacteria
GTG
His
>WENV183614988
OOEA01025496
20437
Alphaproteobacteria
GGA
Ser
>WENV183614948
OOEA01018229
201940
Alphaproteobacteria
CAT
Met
>WENV183614786
OOEA01000805
288727
Alphaproteobacteria
>WENV183615196
OOEA01104279
193088
Alphaproteobacteria
GAT
Ile
>WENV183614943
OOEA01016877
178734
Alphaproteobacteria
TGG
Pro
>WENV183614918
OOEA01011276
400031
Alphaproteobacteria
TTG
Gln
>WENV183614879
OOEA01006150
121250
Alphaproteobacteria
TAG
Leu
>WENV183614942
OOEA01016877
178733
Alphaproteobacteria
CAT
Met
>WENV183615092
OOEA01054121
140892
Alphaproteobacteria
TAG
Leu
>WENV183614907
OOEA01009128
29729
Alphaproteobacteria
GCT
Ser
>WENV183614772
OOEA01000487
102146
Alphaproteobacteria
GTA
Tyr
>WENV183614945
OOEA01017145
404744
Alphaproteobacteria
GCC
Gly
>WENV183614885
OOEA01006453
100184
Alphaproteobacteria
CAG
Leu
>WENV183614815
OOEA01001876
33571
Alphaproteobacteria
TGA
Ser
>WENV183614857
OOEA01004171
73167
Alphaproteobacteria
GAG
Leu
>WENV183614920
OOEA01011667
192275
Alphaproteobacteria
GTG
His
>WENV183614852
OOEA01004048
210458
Alphaproteobacteria
CGG
Pro
>WENV183614777
OOEA01000643
400517
Alphaproteobacteria
GGT
Thr
>WENV183614919
OOEA01011591
281650
Alphaproteobacteria
CCA
Trp
>WENV183615235
OOEA01128694
481098
Alphaproteobacteria
CTG
Gln
>WENV183615050
OOEA01040881
215287
Alphaproteobacteria
GGG
Pro
>WENV183614898
OOEA01007937
400515
Alphaproteobacteria
GAC
Val
>WENV183615040
OOEA01036712
281676
Alphaproteobacteria
TAC
Val
>WENV183614763
OOEA01000167
282981
Alphaproteobacteria
CCA
Trp
>WENV183615172
OOEA01089149
178784
Alphaproteobacteria
CAT
Met
>WENV183614870
OOEA01005125
481099
Alphaproteobacteria
TCC
Gly
>WENV183614912
OOEA01010668
480900
Alphaproteobacteria
GCA
Cys
>WENV183614982
OOEA01024287
398996
Alphaproteobacteria
GCC
Gly
>WENV183615241
OOEA01135526
398996
Alphaproteobacteria
GCC
Gly
>WENV183614951
OOEA01018968
283257
Alphaproteobacteria
TTT
Lys
>WENV183615188
OOEA01098644
13340
Alphaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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