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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183698571
OZSS01001976
29841
Alphaproteobacteria
GGA
Ser
>WENV183698997
OZSS01009098
140876
Alphaproteobacteria
>WENV183699915
OZSS01065825
140963
Alphaproteobacteria
>WENV183698381
OZSS01000754
201940
Alphaproteobacteria
CAT
Met
>WENV183698848
OZSS01005712
201940
Alphaproteobacteria
CAT
Met
>WENV183699181
OZSS01014870
197241
Alphaproteobacteria
GGG
Pro
>WENV183699734
OZSS01047298
290043
Alphaproteobacteria
TGC
Ala
>WENV183700383
OZSS01213511
481268
Alphaproteobacteria
TCC
Gly
>WENV183698660
OZSS01002882
481268
Alphaproteobacteria
TCC
Gly
>WENV183699354
OZSS01022241
73490
Alphaproteobacteria
GAG
Leu
>WENV183699295
OZSS01019661
193088
Alphaproteobacteria
GAT
Ile
>WENV183699003
OZSS01009317
314617
Alphaproteobacteria
TAC
Val
>WENV183698147
OZSS01000011
314617
Alphaproteobacteria
TAC
Val
>WENV183698661
OZSS01002882
75222
Alphaproteobacteria
GAG
Leu
>WENV183699289
OZSS01019540
281659
Alphaproteobacteria
TGC
Ala
>WENV183698608
OZSS01002266
400384
Alphaproteobacteria
TTC
Glu
>WENV183698193
OZSS01000083
29702
Alphaproteobacteria
GGA
Ser
>WENV183698474
OZSS01001283
29702
Alphaproteobacteria
GGA
Ser
>WENV183699028
OZSS01010001
179941
Alphaproteobacteria
CAT
Met
>WENV183699389
OZSS01023612
29729
Alphaproteobacteria
GCT
Ser
>WENV183698339
OZSS01000554
436046
Alphaproteobacteria
GAC
Val
>WENV183699843
OZSS01057820
435083
Alphaproteobacteria
>WENV183699270
OZSS01018561
435083
Alphaproteobacteria
>WENV183698601
OZSS01002186
435083
Alphaproteobacteria
>WENV183698511
OZSS01001417
435083
Alphaproteobacteria
>WENV183698504
OZSS01001379
400544
Alphaproteobacteria
GGT
Thr
>WENV183698139
OZSS01000003
281650
Alphaproteobacteria
CCA
Trp
>WENV183698672
OZSS01003054
427428
Alphaproteobacteria
GCC
Gly
>WENV183698320
OZSS01000446
228432
Alphaproteobacteria
TGG
Pro
>WENV183698728
OZSS01003703
488318
Alphaproteobacteria
TCC
Gly
>WENV183698380
OZSS01000753
398994
Alphaproteobacteria
GTT
Asn
>WENV183698520
OZSS01001491
29495
Alphaproteobacteria
GCT
Ser
>WENV183699496
OZSS01028852
228484
Alphaproteobacteria
CCG
Arg
>WENV183698685
OZSS01003179
338616
Alphaproteobacteria
TGC
Ala
>WENV183699717
OZSS01045699
283257
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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