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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183745668
POVV01000276
285360
Bacteroidota
TTT
Lys
>WENV183745699
POVV01000378
280557
Bacteroidota
CAT
Met
>WENV183745675
POVV01000298
29791
Bacteroidota
GCT
Ser
>WENV183745596
POVV01000121
219805
Bacteroidota
GTC
Asp
>WENV183745623
POVV01000168
219805
Bacteroidota
GTC
Asp
>WENV183745624
POVV01000168
219805
Bacteroidota
GTC
Asp
>WENV183745939
POVV01002185
219805
Bacteroidota
GTC
Asp
>WENV183745676
POVV01000298
398860
Bacteroidota
CTC
Glu
>WENV183746092
POVV01007773
398860
Bacteroidota
CTC
Glu
>WENV183745586
POVV01000111
480404
Bacteroidota
TTG
Gln
>WENV183745974
POVV01002855
332896
Bacteroidota
TTT
Lys
>WENV183745794
POVV01000785
332896
Bacteroidota
TTT
Lys
>WENV183745502
POVV01000036
20766
Bacteroidota
GGA
Ser
>WENV183746063
POVV01005908
107227
Bacteroidota
GTA
Tyr
>WENV183745696
POVV01000347
73011
Bacteroidota
CAA
Leu
>WENV183745456
POVV01000022
73011
Bacteroidota
CAA
Leu
>WENV183745657
POVV01000227
159415
Bacteroidota
TAC
Val
>WENV183745658
POVV01000227
159415
Bacteroidota
TAC
Val
>WENV183746066
POVV01006173
176192
Bacteroidota
TCT
Arg
>WENV183745999
POVV01003320
176192
Bacteroidota
TCT
Arg
>WENV183745704
POVV01000408
176192
Bacteroidota
TCT
Arg
>WENV183746010
POVV01003620
156405
Bacteroidota
TAC
Val
>WENV183745556
POVV01000083
416636
Bacteroidota
TTC
Glu
>WENV183745723
POVV01000460
416636
Bacteroidota
TTC
Glu
>WENV183745765
POVV01000680
416636
Bacteroidota
TTC
Glu
>WENV183746078
POVV01007328
416636
Bacteroidota
TTC
Glu
>WENV183746107
POVV01008128
416636
Bacteroidota
TTC
Glu
>WENV183746109
POVV01008322
416636
Bacteroidota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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