tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).

Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
Identical group No.12502 (133 seq.)
>W1710802996	LJYF01000035	Alphaproteobacteria	Bradyrhizobium yuanmingense [LJYF]	99365	99457	+	Ser	GCT	[ENA]	○
>W1710877765	LMQJ01000064	Alphaproteobacteria	Bradyrhizobium sp. Leaf396 [LMQJ]	69793	69701	-	Ser	GCT	[ENA]	○
>W1711072977	LSIC01000041	Alphaproteobacteria	Bradyrhizobium sp. CCH5-F6 [LSIC]	91655	91563	-	Ser	GCT	[ENA]	○
>W1711124781	LUKO01000055	Alphaproteobacteria	Bradyrhizobium liaoningense [LUKO]	121859	121767	-	Ser	GCT	[ENA]	○
>W1711138873	LVEM01000001	Alphaproteobacteria	Bradyrhizobium stylosanthis [LVEM]	807522	807430	-	Ser	GCT	[ENA]	○
>W1711180116	LWIG01000014	Alphaproteobacteria	Bradyrhizobium sacchari BR10280 [LWIG]	217366	217458	+	Ser	GCT	[ENA]	○
>W1711193135	LWUI01000011	Alphaproteobacteria	Bradyrhizobium elkanii [LWUI]	398281	398373	+	Ser	GCT	[ENA]	○
>W1711206746	LXEM01000022	Alphaproteobacteria	Bradyrhizobium elkanii [LXEM]	59370	59278	-	Ser	GCT	[ENA]	○
>W131164098	ARAG01000009	Alphaproteobacteria	Bradyrhizobium elkanii USDA 76 [ARAG]	1467619	1467711	+	Ser	GCT	[ENA]	○
>W131167486	ARDH01000047	Alphaproteobacteria	Bradyrhizobium sp. WSM4349 WSM4349 [ARDH]	1417	1509	+	Ser	GCT	[ENA]	○
>W131170250	ARFJ01000022	Alphaproteobacteria	Bradyrhizobium japonicum USDA 124 [ARFJ]	38922	38830	-	Ser	GCT	[ENA]	○
>W131217324	ATWP01000010	Alphaproteobacteria	Bradyrhizobium japonicum is5 [ATWP]	80857	80765	-	Ser	GCT	[ENA]	○
>W131228699	AUGD01000010	Alphaproteobacteria	Bradyrhizobium japonicum in8p8 [AUGD]	80547	80455	-	Ser	GCT	[ENA]	○
>W1711487035	MKFI01000001	Alphaproteobacteria	Bradyrhizobium mercantei SEMIA 6399 [MKFI]	285837	285929	+	Ser	GCT	[ENA]	○
>W1711613024	MOXO01000198	Alphaproteobacteria	Bradyrhizobium elkanii [MOXO]	15047	14955	-	Ser	GCT	[ENA]	○
>W1711928306	NAEX01000180	Alphaproteobacteria	Bradyrhizobium canariense [NAEX]	283684	283592	-	Ser	GCT	[ENA]	○
>W1711928322	NAEY01000120	Alphaproteobacteria	Bradyrhizobium canariense [NAEY]	15731	15639	-	Ser	GCT	[ENA]	○
>W1711928402	NAEZ01000181	Alphaproteobacteria	Bradyrhizobium canariense [NAEZ]	229206	229298	+	Ser	GCT	[ENA]	○
>W1711928434	NAFA01000196	Alphaproteobacteria	Bradyrhizobium canariense [NAFA]	19600	19692	+	Ser	GCT	[ENA]	○
>W1711928463	NAFB01000121	Alphaproteobacteria	Bradyrhizobium canariense [NAFB]	15680	15588	-	Ser	GCT	[ENA]	○
>W1711928537	NAFC01000172	Alphaproteobacteria	Bradyrhizobium canariense [NAFC]	261303	261211	-	Ser	GCT	[ENA]	○
>W1711928552	NAFD01000155	Alphaproteobacteria	Bradyrhizobium canariense [NAFD]	42331	42239	-	Ser	GCT	[ENA]	○
>W1711928600	NAFE01000187	Alphaproteobacteria	Bradyrhizobium canariense [NAFE]	42331	42239	-	Ser	GCT	[ENA]	○
>W1711928645	NAFF01000047	Alphaproteobacteria	Bradyrhizobium canariense [NAFF]	14492	14400	-	Ser	GCT	[ENA]	○
>W1711928697	NAFG01000142	Alphaproteobacteria	Bradyrhizobium canariense [NAFG]	42331	42239	-	Ser	GCT	[ENA]	○
>W1711928744	NAFH01000126	Alphaproteobacteria	Bradyrhizobium canariense [NAFH]	14439	14347	-	Ser	GCT	[ENA]	○
>W1711928793	NAFI01000146	Alphaproteobacteria	Bradyrhizobium canariense [NAFI]	42331	42239	-	Ser	GCT	[ENA]	○
>W1711928847	NAFJ01000129	Alphaproteobacteria	Bradyrhizobium canariense [NAFJ]	464	372	-	Ser	GCT	[ENA]	○
>W1711928889	NAFK01000145	Alphaproteobacteria	Bradyrhizobium canariense [NAFK]	74017	74109	+	Ser	GCT	[ENA]	○
>W1712049618	NFUH01000266	Alphaproteobacteria	Bradyrhizobium guangdongense [NFUH]	6483	6391	-	Ser	GCT	[ENA]	○
>C171021121	CP013127	Alphaproteobacteria	Bradyrhizobium diazoefficiens USDA 122 [CP013127]	4519478	4519386	-	Ser	GCT	-	○
>C171131941	LT859959	Alphaproteobacteria	Bradyrhizobium sp. ORS 285 [LT859959]	4187001	4187093	+	Ser	GCT	-	○
>C003058	BA000040	Alphaproteobacteria	Bradyrhizobium diazoefficiens USDA 110 USDA110 [BA000040]	5640958	5641050	+	Ser	GCT	[Ensembl]	○
>W141001297	ADOU01000070	Alphaproteobacteria	Bradyrhizobium diazoefficiens SEMIA 5080 [ADOU]	440425	440517	+	Ser	GCT	[ENA]	○
>W141041849	AMCQ01000778	Alphaproteobacteria	Bradyrhizobium sp. CCGE-LA001 [AMCQ]	362	454	+	Ser	GCT	[ENA]	○
>W141043062	AMFB01000029	Alphaproteobacteria	Bradyrhizobium sp. DFCI-1 [AMFB]	87976	87884	-	Ser	GCT	[ENA]	○
>W141063668	APJD01000020	Alphaproteobacteria	Bradyrhizobium sp. OHSU_III [APJD]	2872	2780	-	Ser	GCT	[ENA]	○
>WENV181379300	OFRD01000358	[OFRD] wastewater metagenome; Exp Tend CN 100WW		3716	3808	+	Ser	GCT	[ENA]	◯
>WENV181384665	OFRI01004521	[OFRI] wastewater metagenome; Exp Tend VB 90WW		323	231	-	Ser	GCT	[ENA]	◯
>WENV181385989	OFRL01000288	[OFRL] wastewater metagenome; Lake Maggiore Cannobio		7248	7156	-	Ser	GCT	[ENA]	◯
>WENV181399852	OFSF01000074	[OFSF] wastewater metagenome; Exp Tend VB 100WW		22673	22581	-	Ser	GCT	[ENA]	◯
>W141150118	AXAD01000003	Alphaproteobacteria	Bradyrhizobium arachidis USDA 3384 [AXAD]	528528	528620	+	Ser	GCT	[ENA]	○
>W141150246	AXAF01000030	Alphaproteobacteria	Bradyrhizobium ottawaense USDA 4 [AXAF]	975	1067	+	Ser	GCT	[ENA]	○
>W141150323	AXAH01000008	Alphaproteobacteria	Bradyrhizobium elkanii USDA 3254 [AXAH]	22201	22109	-	Ser	GCT	[ENA]	○
>W141151048	AXAT01000098	Alphaproteobacteria	Bradyrhizobium japonicum USDA 135 [AXAT]	23939	24031	+	Ser	GCT	[ENA]	○
>W141151191	AXAW01000007	Alphaproteobacteria	Bradyrhizobium elkanii USDA 3259 [AXAW]	22199	22107	-	Ser	GCT	[ENA]	○
>W141151226	AXAX01000002	Alphaproteobacteria	Bradyrhizobium diazoefficiens USDA 122 [AXAX]	372933	372841	-	Ser	GCT	[ENA]	○
>W141151269	AXAY01000003	Alphaproteobacteria	Bradyrhizobium sp. WSM3983 [AXAY]	353283	353375	+	Ser	GCT	[ENA]	○
>W141151328	AXAZ01000019	Alphaproteobacteria	Bradyrhizobium sp. WSM1743 [AXAZ]	82238	82146	-	Ser	GCT	[ENA]	○
>W141151476	AXBC01000003	Alphaproteobacteria	Bradyrhizobium genosp. SA-4 SA-4 str. CB756 [AXBC]	1304055	1303963	-	Ser	GCT	[ENA]	○
>W141168835	AXVG01000011	Alphaproteobacteria	Bradyrhizobium japonicum 22 [AXVG]	987491	987399	-	Ser	GCT	[ENA]	○
>W141220427	AZXU01000003	Alphaproteobacteria	Bradyrhizobium sp. WSM1417 [AZXU]	213540	213632	+	Ser	GCT	[ENA]	○
>W141233897	BAWE01000005	Alphaproteobacteria	Bradyrhizobium sp. DOA9 [BAWE]	157865	157957	+	Ser	GCT	[ENA]	○
>W141275957	JADK01000008	Alphaproteobacteria	Bradyrhizobium sp. URHA0013 [JADK]	12349	12441	+	Ser	GCT	[ENA]	○
>WENV170707416	LNAP01020032	[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with		4241	4149	-	Ser	GCT	[ENA]	◯
>C181113186	CP025113	Alphaproteobacteria	Bradyrhizobium sp. SK17 [CP025113]	5815189	5815281	+	Ser	GCT	-	○
>C181178165	CP029425	Alphaproteobacteria	Bradyrhizobium ottawaense OO99 [CP029425]	5967995	5967903	-	Ser	GCT	-	○
>C181178192	CP029426	Alphaproteobacteria	Bradyrhizobium amphicarpaeae 39S1MB [CP029426]	3814828	3814920	+	Ser	GCT	-	○
>C181178236	CP029427	Alphaproteobacteria	Bradyrhizobium symbiodeficiens 85S1MB [CP029427]	3639977	3640069	+	Ser	GCT	-	○
>C181181562	CP029603	Alphaproteobacteria	Bradyrhizobium diazoefficiens XF7 [CP029603]	5859832	5859924	+	Ser	GCT	-	○
>C181203875	LS398110	Alphaproteobacteria	Bradyrhizobium vignae [LS398110]	3667616	3667524	-	Ser	GCT	-	○
>C191019689	CP022219	Alphaproteobacteria	Bradyrhizobium guangxiense CCBAU 53363 [CP022219]	3739457	3739549	+	Ser	GCT	-	○
>C191092028	CP032617	Alphaproteobacteria	Bradyrhizobium diazoefficiens 110spc4 [CP032617]	5576602	5576694	+	Ser	GCT	-	○
>C191186631	CP041090	Alphaproteobacteria	Bradyrhizobium symbiodeficiens 65S1MB [CP041090]	2899400	2899492	+	Ser	GCT	-	○
>W1910183121	BJNL01000015	Alphaproteobacteria	Bradyrhizobium elkanii NBRC 14791 [BJNL]	47627	47719	+	Ser	GCT	[ENA]	○
>W1910598266	LAXE01000001	Alphaproteobacteria	Bradyrhizobium sp. SUTN9-2 [LAXE]	4032741	4032649	-	Ser	GCT	[ENA]	○
>W1910598961	LBJC01000033	Alphaproteobacteria	Bradyrhizobium nanningense CCBAU 53390 [LBJC]	120075	119983	-	Ser	GCT	[ENA]	○
>W1910599051	LBJQ01000086	Alphaproteobacteria	Bradyrhizobium nanningense CCBAU 51757 [LBJQ]	120053	119961	-	Ser	GCT	[ENA]	○
>W1910611582	LFJC01000003	Alphaproteobacteria	Bradyrhizobium nitroreducens TSA1 [LFJC]	213114	213022	-	Ser	GCT	[ENA]	○
>W1910693471	MDEP01000044	Alphaproteobacteria	Bradyrhizobium sp. UASWS1016 [MDEP]	345848	345756	-	Ser	GCT	[ENA]	○
>W1910840273	MZXW01000022	Alphaproteobacteria	Bradyrhizobium betae Opo-243 [MZXW]	186738	186830	+	Ser	GCT	[ENA]	○
>W1911245287	NSJY01000016	Alphaproteobacteria	Bradyrhizobium sp. UFLA03-84 [NSJY]	143069	143161	+	Ser	GCT	[ENA]	○
>W1911409781	NWTE01000008	Alphaproteobacteria	Bradyrhizobium diazoefficiens Y21 [NWTE]	221819	221911	+	Ser	GCT	[ENA]	○
>W1911409849	NWTF01000017	Alphaproteobacteria	Bradyrhizobium ottawaense L2 [NWTF]	122500	122592	+	Ser	GCT	[ENA]	○
>W1911409908	NWTG01000008	Alphaproteobacteria	Bradyrhizobium sp. C9 [NWTG]	71834	71742	-	Ser	GCT	[ENA]	○
>W1911410021	NWTI01000021	Alphaproteobacteria	Bradyrhizobium sp. Y36 [NWTI]	39491	39399	-	Ser	GCT	[ENA]	○
>W1911817872	QZMV01000006	Alphaproteobacteria	Bradyrhizobium sp. LVM 105 [QZMV]	256610	256702	+	Ser	GCT	[ENA]	○
>W1810104420	PGVG01000010	Alphaproteobacteria	Bradyrhizobium forestalis INPA54B [PGVG]	26013	25921	-	Ser	GCT	[ENA]	○
>W1810289871	PTFE01000049	Alphaproteobacteria	Bradyrhizobium sp. AC87j1 [PTFE]	38816	38724	-	Ser	GCT	[ENA]	○
>W1810367842	PVYZ01000001	Alphaproteobacteria	Rhizobium tropici NFR14 [PVYZ]	526906	526998	+	Ser	GCT	[ENA]	○
>W1810400106	PYFV01000009	Alphaproteobacteria	Bradyrhizobium sp. MOS004 [PYFV]	119423	119515	+	Ser	GCT	[ENA]	○
>W1810400168	PYFW01000010	Alphaproteobacteria	Bradyrhizobium sp. MOS003 [PYFW]	90715	90623	-	Ser	GCT	[ENA]	○
>W1810400206	PYFX01000006	Alphaproteobacteria	Bradyrhizobium sp. MOS002 [PYFX]	72818	72910	+	Ser	GCT	[ENA]	○
>SRA1014268	SRR023845.66785	Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)		165	257	+	Ser	GCT	[SRA]
>W1511508009	JXOF01000187	Alphaproteobacteria	Bradyrhizobium elkanii UASWS1015 [JXOF]	334052	334144	+	Ser	GCT	[ENA]	○
>W1511533275	JYMR01000034	Alphaproteobacteria	Bradyrhizobium sp. LTSP849 [JYMR]	87437	87529	+	Ser	GCT	[ENA]	○
>W1511533331	JYMS01000049	Alphaproteobacteria	Bradyrhizobium sp. LTSP857 [JYMS]	79428	79520	+	Ser	GCT	[ENA]	○
>W1511681408	LFIP01000027	Alphaproteobacteria	Bradyrhizobium embrapense SEMIA 6208 [LFIP]	91473	91565	+	Ser	GCT	[ENA]	○
>W1511681485	LFIQ01000092	Alphaproteobacteria	Bradyrhizobium pachyrhizi PAC 48 [LFIQ]	189489	189397	-	Ser	GCT	[ENA]	○
>W1511684031	LFLZ01000026	Alphaproteobacteria	Bradyrhizobium tropiciagri SEMIA 6148 [LFLZ]	96524	96616	+	Ser	GCT	[ENA]	○
>W1511705994	LGTB01000011	Alphaproteobacteria	Bradyrhizobium viridifuturi SEMIA 690 [LGTB]	125630	125722	+	Ser	GCT	[ENA]	○
>W1511706703	LGUJ01000011	Alphaproteobacteria	Bradyrhizobium diazoefficiens Is-1 [LGUJ]	451612	451520	-	Ser	GCT	[ENA]	○
>C121000748	AP012279	Alphaproteobacteria	Bradyrhizobium cosmicum S23321 [AP012279]	3218736	3218644	-	Ser	GCT	[Ensembl]	○
>C161001036	AP014685	Alphaproteobacteria	Bradyrhizobium diazoefficiens NK6 [AP014685]	9580215	9580307	+	Ser	GCT	-	○
>C161034230	CP011360	Alphaproteobacteria	Bradyrhizobium diazoefficiens USDA 110 [CP011360]	4960625	4960717	+	Ser	GCT	-	○
>C161062532	CP013949	Alphaproteobacteria	Bradyrhizobium sp. CCGE-LA001 [CP013949]	4657829	4657921	+	Ser	GCT	[Ensembl]	○
>C161107855	LN901633	Alphaproteobacteria	Bradyrhizobium sp. [LN901633]	6627480	6627388	-	Ser	GCT	-	○
>W121036201	AHLW01000001	Alphaproteobacteria	Bradyrhizobium sp. WSM471 [AHLW]	4896990	4897082	+	Ser	GCT	[ENA]	○
>W121036455	AHMB01000069	Alphaproteobacteria	Bradyrhizobium sp. WSM1253 [AHMB]	39556	39464	-	Ser	GCT	[ENA]	○
>W121062456	AJJK01001215	Alphaproteobacteria	Bradyrhizobium elkanii 587 [AJJK]	2582	2490	-	Ser	GCT	[ENA]	○
>W121065263	AJPW01000461	Alphaproteobacteria	Bradyrhizobium elkanii CCBAU 43297 [AJPW]	672	764	+	Ser	GCT	[ENA]	○
>W121065516	AJQC01000030	Alphaproteobacteria	Bradyrhizobium liaoningense CCBAU 05525 [AJQC]	6365	6457	+	Ser	GCT	[ENA]	○
>W121065584	AJQD01000392	Alphaproteobacteria	Bradyrhizobium liaoningense CCBAU 83689 [AJQD]	129	37	-	Ser	GCT	[ENA]	○
>W121065635	AJQE01000243	Alphaproteobacteria	Bradyrhizobium sp. CCBAU 43298 [AJQE]	5043	4951	-	Ser	GCT	[ENA]	○
>W121065686	AJQF01000385	Alphaproteobacteria	Bradyrhizobium sp. CCBAU 15544 [AJQF]	675	767	+	Ser	GCT	[ENA]	○
>W121065740	AJQG01000292	Alphaproteobacteria	Bradyrhizobium sp. CCBAU 15615 [AJQG]	6493	6585	+	Ser	GCT	[ENA]	○
>W121065778	AJQH01000221	Alphaproteobacteria	Bradyrhizobium sp. CCBAU 15635 [AJQH]	8603	8511	-	Ser	GCT	[ENA]	○
>W121065822	AJQI01000220	Alphaproteobacteria	Bradyrhizobium diazoefficiens CCBAU 41267 [AJQI]	27448	27540	+	Ser	GCT	[ENA]	○
>W121065861	AJQJ01000181	Alphaproteobacteria	Bradyrhizobium yuanmingense CCBAU 05623 [AJQJ]	6350	6442	+	Ser	GCT	[ENA]	○
>W121065913	AJQK01000167	Alphaproteobacteria	Bradyrhizobium yuanmingense CCBAU 25021 [AJQK]	17644	17736	+	Ser	GCT	[ENA]	○
>W121065980	AJQL01000403	Alphaproteobacteria	Bradyrhizobium yuanmingense CCBAU 35157 [AJQL]	17636	17728	+	Ser	GCT	[ENA]	○
>W121085064	AKIY01000088	Alphaproteobacteria	Bradyrhizobium sp. YR681 [AKIY]	6338	6430	+	Ser	GCT	[ENA]	○
>W121127076	CAFH01000066	Alphaproteobacteria	Bradyrhizobium sp. ORS 285 [CAFH]	1467	1559	+	Ser	GCT	[ENA]	○
>W1610049412	BBEX01000939	Alphaproteobacteria	Bradyrhizobium sp. 17-4 [BBEX]	958	1050	+	Ser	GCT	[ENA]	○
>W1610514428	FMAE01000005	Alphaproteobacteria	Bradyrhizobium yuanmingense [FMAE]	682695	682787	+	Ser	GCT	[ENA]	○
>W1610514638	FMAI01000050	Alphaproteobacteria	Bradyrhizobium shewense err11 [FMAI]	25959	26051	+	Ser	GCT	[ENA]	○
>W1610549137	JXDL01000001	Alphaproteobacteria	Bradyrhizobium sp. AT1 [JXDL]	1256874	1256966	+	Ser	GCT	[ENA]	○
>W1610550323	JXJM01000001	Alphaproteobacteria	Bradyrhizobium sp. DOA1 [JXJM]	2623718	2623626	-	Ser	GCT	[ENA]	○
>W1610666853	LJYF01000035	Alphaproteobacteria	Bradyrhizobium yuanmingense [LJYF]	99365	99457	+	Ser	GCT	[ENA]	○
>W1610740111	LMQJ01000064	Alphaproteobacteria	Bradyrhizobium sp. Leaf396 [LMQJ]	69793	69701	-	Ser	GCT	[ENA]	○
>W1610912237	LSIC01000041	Alphaproteobacteria	Bradyrhizobium sp. CCH5-F6 [LSIC]	91655	91563	-	Ser	GCT	[ENA]	○
>W1610935753	LUKO01000055	Alphaproteobacteria	Bradyrhizobium liaoningense [LUKO]	121859	121767	-	Ser	GCT	[ENA]	○
>W1610949881	LVEM01000001	Alphaproteobacteria	Bradyrhizobium stylosanthis [LVEM]	807522	807430	-	Ser	GCT	[ENA]	○
>W1710045811	BBEX01000939	Alphaproteobacteria	Bradyrhizobium sp. 17-4 [BBEX]	958	1050	+	Ser	GCT	[ENA]	○
>W1710500118	FMAE01000005	Alphaproteobacteria	Bradyrhizobium yuanmingense [FMAE]	682695	682787	+	Ser	GCT	[ENA]	○
>W1710500328	FMAI01000050	Alphaproteobacteria	Bradyrhizobium shewense err11 [FMAI]	25959	26051	+	Ser	GCT	[ENA]	○
>W1710546020	FOBX01000010	Alphaproteobacteria	Bradyrhizobium sp. OK095 [FOBX]	108047	108139	+	Ser	GCT	[ENA]	○
>W1710564445	FOQM01000031	Alphaproteobacteria	Bradyrhizobium sp. Gha [FOQM]	952	1044	+	Ser	GCT	[ENA]	○
>W1710569804	FOUS01000007	Alphaproteobacteria	Bradyrhizobium sp. Rc3b [FOUS]	366040	366132	+	Ser	GCT	[ENA]	○
>W1710578536	FPBQ01000035	Alphaproteobacteria	Bradyrhizobium arachidis [FPBQ]	28845	28937	+	Ser	GCT	[ENA]	○
>W1710652711	JXDL01000001	Alphaproteobacteria	Bradyrhizobium sp. AT1 [JXDL]	1256874	1256966	+	Ser	GCT	[ENA]	○
>W1710659049	JXJM01000001	Alphaproteobacteria	Bradyrhizobium sp. DOA1 [JXJM]	2623718	2623626	-	Ser	GCT	[ENA]	○
>W1710735592	LGHK01000100	Alphaproteobacteria	Bradyrhizobium sp. NAS96.2 [LGHK]	88568	88660	+	Ser	GCT	[ENA]	○