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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.147120 (9 seq.)
>WENV170979576
MTKZ01096819
[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
3568
3645
+
Pro
TGG
[ENA]
¡û
>W2110083765
CAIOGK010000028
Unclassified
Candidatus Falkowbacteria bacterium [CAIOGK]
12633
12558
-
Pro
TGG
[ENA]
¡û
>W2110409986
JAEHGQ010000004
Unclassified
Candidatus Falkowbacteria bacterium S1_L12 [JAEHGQ]
2411
2486
+
Pro
TGG
[ENA]
¡û
>W2110410049
JAEHGT010000001
Unclassified
Candidatus Falkowbacteria bacterium S3_K08 [JAEHGT]
150121
150046
-
Pro
TGG
[ENA]
¡û
>W2110410092
JAEHGU010000035
Unclassified
Candidatus Falkowbacteria bacterium S3_L10 [JAEHGU]
1289
1364
+
Pro
TGG
[ENA]
¡û
>W2110410125
JAEHGW010000022
Unclassified
Candidatus Falkowbacteria bacterium S5_F19 [JAEHGW]
4368
4443
+
Pro
TGG
[ENA]
¡û
>W2110410138
JAEHGX010000002
Unclassified
Candidatus Falkowbacteria bacterium S5_I03 [JAEHGX]
82477
82552
+
Pro
TGG
[ENA]
¡û
>W2110410445
JAEHHK010000002
Unclassified
Candidatus Falkowbacteria bacterium CAG4 [JAEHHK]
68830
68905
+
Pro
TGG
[ENA]
¡û
>W1511610449
LCGL01000001
Unclassified
Candidatus Falkowbacteria bacterium GW2011_GWF2_43_32 bacterium GW2011_GWF2_43_32 [LCGL]
262197
262272
+
Pro
TGG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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