tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.225356 (60 seq.)
>W1710873095 LMMN01000012 Alphaproteobacteria Methylobacterium sp. Leaf90 [LMMN] 278188 278112 - His GTG [ENA] ¡û
>W1710874356 LMNN01000022 Alphaproteobacteria Methylobacterium sp. Leaf119 [LMNN] 696414 696338 - His GTG [ENA] ¡û
>W1710874444 LMNP01000031 Alphaproteobacteria Methylobacterium sp. Leaf121 [LMNP] 113231 113307 + His GTG [ENA] ¡û
>W1710878310 LMQV01000041 Alphaproteobacteria Methylobacterium sp. Leaf456 [LMQV] 293457 293533 + His GTG [ENA] ¡û
>W1711571747 MNAO01000063 Alphaproteobacteria Methylorubrum extorquens [MNAO] 15650 15574 - His GTG [ENA] ¡û
>W131051739 AMXU01000065 Alphaproteobacteria Methylobacterium sp. MB200 [AMXU] 754 678 - His GTG [ENA] ¡û
>WENV180284484 OBID01048095 [OBID] metagenome; sludge 854 930 + His GTG [ENA] ¡û
>C08006510 CP000908 Alphaproteobacteria Methylorubrum extorquens PA1 [CP000908] 3117692 3117619 - His GTG [Ensembl] ¡û
>C08006658 CP001029 Alphaproteobacteria Methylorubrum populi BJ001 [CP001029] 3127719 3127646 - His GTG [Ensembl] ¡û
>WENV170124766 CENP01007204 [CENP] marine metagenome genome assembly TARA_030_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 172 96 - His GTG [ENA] ¡û
>WENV170393702 CEUB01232762 [CEUB] marine metagenome genome assembly TARA_138_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 335 259 - His GTG [ENA] ¡û
>WENV170402257 CEUE01342135 [CEUE] marine metagenome genome assembly TARA_133_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 141 65 - His GTG [ENA] ¡û
>WENV170807512 MDSW01099930 [MDSW] marine metagenome; seawater 861 937 + His GTG [ENA] ¡û
>WENV170869435 MDTB01175982 [MDTB] marine metagenome; seawater 14018 14094 + His GTG [ENA] ¡û
>WENV170870923 MDTB01199340 [MDTB] marine metagenome; seawater 658 734 + His GTG [ENA] ¡û
>WENV170872123 MDTB01214527 [MDTB] marine metagenome; seawater 2241 2165 - His GTG [ENA] ¡û
>WENV170872260 MDTB01216156 [MDTB] marine metagenome; seawater 3397 3473 + His GTG [ENA] ¡û
>WENV170974261 MTKY01056230 [MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 4222 4298 + His GTG [ENA] ¡û
>C181227836 LT962688 Alphaproteobacteria Methylorubrum extorquens TK 0001 [LT962688] 2761801 2761877 + His GTG - ¡û
>W09106845 ABEC01000002 Alphaproteobacteria Methylorubrum extorquens PA1 [ABEC] 190701 190625 - His GTG [ENA] ¡û
>C09107439 CP001298 Alphaproteobacteria Methylorubrum extorquens CM4 [CP001298] 3177403 3177327 - His GTG [Ensembl] ¡û
>C09107526 FP103042 Alphaproteobacteria Methylorubrum extorquens DM4 [FP103042] 3482703 3482627 - His GTG [Ensembl] ¡û
>W1810445049 PZKG01000118 Alphaproteobacteria Cereibacter changlensis JA139 [PZKG] 10777 10701 - His GTG [ENA] ¡û
>W1810686011 QKZS01000019 Alphaproteobacteria Cereibacter changlensis DSM 18774 [QKZS] 53327 53251 - His GTG [ENA] ¡û
>SRA1015780 SRR023846.197294 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 39 115 + His GTG [SRA]
>SRA1015854 SRR023846.230264 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 38 114 + His GTG [SRA]
>SRA1015900 SRR023846.248361 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 39 115 + His GTG [SRA]
>SRA1016486 SRR023846.526333 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 118 42 - His GTG [SRA]
>W2010100646 BJVP01000011 Alphaproteobacteria Methylorubrum extorquens NBRC 15911 [BJVP] 174891 174815 - His GTG [ENA] ¡û
>W2010535214 JAAPAY010000030 Alphaproteobacteria Methylobacterium sp. ISTM1 [JAAPAY] 107108 107184 + His GTG [ENA] ¡û
>W2010712736 JACHOP010000004 Alphaproteobacteria Methylorubrum rhodinum DSM 2163 [JACHOP] 167738 167662 - His GTG [ENA] ¡û
>W2010740295 JACJIB010000003 Alphaproteobacteria Methylorubrum thiocyanatum DSM 11490 [JACJIB] 170176 170100 - His GTG [ENA] ¡û
>W2011398140 RCIG01000003 Alphaproteobacteria Methylobacterium sp. DB1607 [RCIG] 69343 69267 - His GTG [ENA] ¡û
>W2011540745 SCOS01000001 Alphaproteobacteria Methylobacterium sp. L1A1 [SCOS] 369584 369660 + His GTG [ENA] ¡û
>W2011676675 SRHQ01000011 Alphaproteobacteria Methylorubrum sp. Q1 [SRHQ] 46661 46585 - His GTG [ENA] ¡û
>W2012311081 WEKV01000010 Alphaproteobacteria Methylorubrum populi Pinkel [WEKV] 651667 651591 - His GTG [ENA] ¡û
>W2110019143 BMCP01000001 Alphaproteobacteria Agaricicola taiwanensis CCM 7684 [BMCP] 993378 993302 - His GTG [ENA] ¡û
>W2110429717 JAEMUK010000004 Alphaproteobacteria Rhodomicrobium udaipurense JA643 [JAEMUK] 89665 89589 - His GTG [ENA] ¡û
>C201079740 CP039546 Alphaproteobacteria Methylorubrum populi YC-XJ1 [CP039546] 2884888 2884812 - His GTG - ¡û
>C201203463 CP047607 Alphaproteobacteria Methylobacterium sp. NI91 [CP047607] 2785250 2785174 - His GTG - ¡û
>C231024565 AP025942 Alphaproteobacteria Methylorubrum sp. GM97 [AP025942] 3016693 3016617 - His GTG - ¡û
>W10112693 ADFF01000005 Alphaproteobacteria Rhodomicrobium vannielii ATCC 17100 [ADFF] 69290 69366 + His GTG [ENA] ¡û
>W2110752799 NKUI01000019 Alphaproteobacteria Methylorubrum zatmanii LMG 6087 [NKUI] 49592 49668 + His GTG [ENA] ¡û
>C231527986 CP110130 Alphaproteobacteria Methylorubrum extorquens NBC_00404 [CP110130] 2587789 2587713 - His GTG - ¡û
>C241180474 CP073633 Alphaproteobacteria Methylorubrum extorquens ATCC 55366 [CP073633] 3350231 3350155 - His GTG - ¡û
>C241261787 CP125860 Alphaproteobacteria Rhodomicrobium lacus DSM 166 [CP125860] 948276 948200 - His GTG - ¡û
>W2310013562 BPQV01000001 Alphaproteobacteria Methylobacterium organophilum NBRC 15689 [BPQV] 284205 284281 + His GTG [ENA] ¡û
>W2310013870 BPRC01000001 Alphaproteobacteria Methylorubrum aminovorans NBRC 15686 [BPRC] 664466 664390 - His GTG [ENA] ¡û
>W2310013929 BPRD01000179 Alphaproteobacteria Methylorubrum podarium DSM 15083 [BPRD] 2525 2449 - His GTG [ENA] ¡û
>W2310013977 BPRE01000009 Alphaproteobacteria Methylorubrum suomiense DSM 14458 [BPRE] 1505 1429 - His GTG [ENA] ¡û
>W11115920 ADFF01000005 Alphaproteobacteria Rhodomicrobium vannielii ATCC 17100 [ADFF] 69290 69366 + His GTG [ENA] ¡û
>C11119039 CP002292 Alphaproteobacteria Rhodomicrobium vannielii ATCC 17100 [CP002292] 994387 994311 - His GTG [Ensembl] ¡û
>C161004986 CP006992 Alphaproteobacteria Methylobacterium sp. AMS5 [CP006992] 2904977 2904901 - His GTG [Ensembl] ¡û
>W1610043190 BAZP01001404 Alphaproteobacteria Methylorubrum thiocyanatum JCM 10893 [BAZP] 231 307 + His GTG [ENA] ¡û
>W121010660 AGJK01000014 Alphaproteobacteria Methylorubrum extorquens DSM 13060 [AGJK] 39589 39665 + His GTG [ENA] ¡û
>W1610735441 LMMN01000012 Alphaproteobacteria Methylobacterium sp. Leaf90 [LMMN] 278188 278112 - His GTG [ENA] ¡û
>W1610736702 LMNN01000022 Alphaproteobacteria Methylobacterium sp. Leaf119 [LMNN] 696414 696338 - His GTG [ENA] ¡û
>W1610736790 LMNP01000031 Alphaproteobacteria Methylobacterium sp. Leaf121 [LMNP] 113231 113307 + His GTG [ENA] ¡û
>W1610740656 LMQV01000041 Alphaproteobacteria Methylobacterium sp. Leaf456 [LMQV] 293457 293533 + His GTG [ENA] ¡û
>W1710040350 BAZP01001404 Alphaproteobacteria Methylorubrum thiocyanatum JCM 10893 [BAZP] 231 307 + His GTG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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