This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.236134 (7 seq.)
>WENV181172795
OEIV010988560
[OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
128
54
-
Ile2
CAT
[ENA]
¡û
>WENV182017723
OHBW01002102
[OHBW] human gut metagenome; feces
2926
3000
+
Ile2
CAT
[ENA]
¡û
>WENV182030688
OHCS01000016
[OHCS] human gut metagenome; feces
14635
14561
-
Ile2
CAT
[ENA]
¡û
>WENV182051526
OHEG01001307
[OHEG] human gut metagenome; feces
2056
1982
-
Ile2
CAT
[ENA]
¡û
>WENV182180198
OHNO01000069
[OHNO] human gut metagenome; feces
14743
14669
-
Ile2
CAT
[ENA]
¡û
>WENV182215430
OHQM01000069
[OHQM] human gut metagenome; feces
14743
14669
-
Ile2
CAT
[ENA]
¡û
>WENV170969592
MTKW01033596
[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
2959
2883
-
Met
CAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK