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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.259409 (191 seq.)
>W1710862429
LMEJ01000010
Alphaproteobacteria
Sphingomonas sp. Root1294 [LMEJ]
106440
106365
-
Phe
GAA
[ENA]
¡û
>W1710863930
LMFM01000014
Alphaproteobacteria
Sphingomonas sp. Root50 [LMFM]
225898
225973
+
Phe
GAA
[ENA]
¡û
>W1710867191
LMIB01000015
Alphaproteobacteria
Sphingomonas sp. Root710 [LMIB]
143771
143696
-
Phe
GAA
[ENA]
¡û
>W1710867300
LMID01000014
Alphaproteobacteria
Sphingomonas sp. Root720 [LMID]
199241
199316
+
Phe
GAA
[ENA]
¡û
>W1710869771
LMJZ01000010
Alphaproteobacteria
Sphingomonas sp. Leaf5 [LMJZ]
56326
56251
-
Phe
GAA
[ENA]
¡û
>W1710870039
LMKE01000033
Alphaproteobacteria
Sphingomonas sp. Leaf10 [LMKE]
31770
31695
-
Phe
GAA
[ENA]
¡û
>W1710870542
LMKP01000011
Alphaproteobacteria
Sphingomonas sp. Leaf22 [LMKP]
12019
12094
+
Phe
GAA
[ENA]
¡û
>W1710870673
LMKS01000001
Alphaproteobacteria
Sphingomonas sp. Leaf24 [LMKS]
829194
829119
-
Phe
GAA
[ENA]
¡û
>W1710871845
LMLN01000013
Alphaproteobacteria
Sphingomonas sp. Leaf62 [LMLN]
199970
200045
+
Phe
GAA
[ENA]
¡û
>W1710871948
LMLP01000021
Alphaproteobacteria
Sphingomonas sp. Leaf67 [LMLP]
513649
513724
+
Phe
GAA
[ENA]
¡û
>W1710872688
LMME01000009
Alphaproteobacteria
Methylobacterium sp. Leaf85 [LMME]
40851
40776
-
Phe
GAA
[ENA]
¡û
>W1710872991
LMML01000006
Alphaproteobacteria
Methylobacterium sp. Leaf89 [LMML]
1748
1823
+
Phe
GAA
[ENA]
¡û
>W1710873440
LMMU01000001
Alphaproteobacteria
Methylobacterium sp. Leaf99 [LMMU]
1610442
1610517
+
Phe
GAA
[ENA]
¡û
>W1710873712
LMMZ01000039
Alphaproteobacteria
Methylobacterium sp. Leaf104 [LMMZ]
187790
187715
-
Phe
GAA
[ENA]
¡û
>W1710874551
LMNS01000001
Alphaproteobacteria
Methylobacterium sp. Leaf123 [LMNS]
512137
512062
-
Phe
GAA
[ENA]
¡û
>W1710877264
LMPY01000023
Alphaproteobacteria
Methylobacterium sp. Leaf361 [LMPY]
226307
226382
+
Phe
GAA
[ENA]
¡û
>W1710878414
LMQY01000003
Alphaproteobacteria
Aureimonas sp. Leaf460 [LMQY]
363369
363294
-
Phe
GAA
[ENA]
¡û
>W1710879199
LMRM01000029
Alphaproteobacteria
Methylobacterium sp. Leaf94 [LMRM]
5556
5631
+
Phe
GAA
[ENA]
¡û
>W1710882973
LMVG01000001
Alphaproteobacteria
Pelagerythrobacter marensis [LMVG]
908302
908377
+
Phe
GAA
[ENA]
¡û
>W1711009260
LQQO01000061
Alphaproteobacteria
Sphingomonas hankookensis [LQQO]
93997
94072
+
Phe
GAA
[ENA]
¡û
>W1711072470
LSHQ01000002
Alphaproteobacteria
Sphingomonas sp. CCH5-A5 [LSHQ]
742
817
+
Phe
GAA
[ENA]
¡û
>W1711072768
LSHX01000025
Alphaproteobacteria
Sphingomonas sp. CCH21-G11 [LSHX]
729
804
+
Phe
GAA
[ENA]
¡û
>W1711073049
LSIE01000091
Alphaproteobacteria
Sphingomonas sp. CCH16-B10 [LSIE]
4336
4261
-
Phe
GAA
[ENA]
¡û
>W1711073281
LSIJ01000105
Alphaproteobacteria
Sphingomonas sp. CCH10-B3 [LSIJ]
6270
6345
+
Phe
GAA
[ENA]
¡û
>W1711073999
LSJC01000214
Alphaproteobacteria
Sphingomonas sp. CCH20-B6 [LSJC]
5650
5725
+
Phe
GAA
[ENA]
¡û
>W1711074000
LSJC01000214
Alphaproteobacteria
Sphingomonas sp. CCH20-B6 [LSJC]
4341
4266
-
Phe
GAA
[ENA]
¡û
>W1711075125
LSKD01000034
Alphaproteobacteria
Sphingomonas sp. CCH19-C6 [LSKD]
4341
4266
-
Phe
GAA
[ENA]
¡û
>W1711075242
LSKG01000003
Alphaproteobacteria
Sphingomonas sp. CCH15-F11 [LSKG]
3954
3879
-
Phe
GAA
[ENA]
¡û
>W1711075293
LSKH01000073
Alphaproteobacteria
Sphingomonas sp. CCH5-D11 [LSKH]
7876
7801
-
Phe
GAA
[ENA]
¡û
>W1711075362
LSKI01000158
Alphaproteobacteria
Sphingomonas sp. CCH18-H6 [LSKI]
3952
3877
-
Phe
GAA
[ENA]
¡û
>W1711075599
LSKO01001061
Alphaproteobacteria
Sphingomonas sp. CCH15-A1 [LSKO]
3961
3886
-
Phe
GAA
[ENA]
¡û
>W1711075672
LSKP01000094
Alphaproteobacteria
Sphingomonas sp. CCH13-B11 [LSKP]
735
810
+
Phe
GAA
[ENA]
¡û
>W1711220329
LXQI01000021
Alphaproteobacteria
Erythrobacter sp. ANT-B3C2 [LXQI]
18711
18786
+
Phe
GAA
[ENA]
¡û
>W1711386370
MEFG01000020
Alphaproteobacteria
Sphingomonas sp. SCN 67-18 [MEFG]
63623
63698
+
Phe
GAA
[ENA]
¡û
>W1711502549
MKSU01000017
Alphaproteobacteria
Sphingomonas sp. 67-36 [MKSU]
84022
84097
+
Phe
GAA
[ENA]
¡û
>W1711942678
NBBI01000003
Alphaproteobacteria
Sphingomonas dokdonensis [NBBI]
193219
193294
+
Phe
GAA
[ENA]
¡û
>W1711942735
NBBJ01000003
Alphaproteobacteria
Sphingomonas mucosissima [NBBJ]
213411
213486
+
Phe
GAA
[ENA]
¡û
>W131098625
AORY01000004
Alphaproteobacteria
Sphingomonas sp. Mn802worker [AORY]
4436
4361
-
Phe
GAA
[ENA]
¡û
>C171092150
CP019322
Alphaproteobacteria
Methylorubrum extorquens PSBB040 [CP019322]
4330223
4330298
+
Phe
GAA
-
¡û
>C171115203
CP021054
Alphaproteobacteria
Methylorubrum zatmanii PSBB041 [CP021054]
4470423
4470348
-
Phe
GAA
-
¡û
>C171117080
CP021181
Alphaproteobacteria
Rhizorhabdus wittichii DC-6 [CP021181]
746365
746290
-
Phe
GAA
-
¡û
>W131196579
ASTM01000012
Alphaproteobacteria
Sphingomonas sp. YL-JM2C [ASTM]
284
359
+
Phe
GAA
[ENA]
¡û
>C024966
CP000699
Alphaproteobacteria
Rhizorhabdus wittichii RW1 [CP000699]
4517782
4517857
+
Phe
GAA
[Ensembl]
¡û
>WENV180016489
FSVG01000602
[FSVG] metagenome; soil
10407
10482
+
Phe
GAA
[ENA]
¡û
>W141103911
AVNX01000049
Alphaproteobacteria
Methylobacterium sp. L2-4 [AVNX]
5524
5449
-
Phe
GAA
[ENA]
¡û
>WENV181226876
OFDN01000253
[OFDN] hot springs metagenome; Water
11554
11629
+
Phe
GAA
[ENA]
¡û
>WENV181384021
OFRH01007284
[OFRH] wastewater metagenome; Exp Tend NO 100WW
1392
1467
+
Phe
GAA
[ENA]
¡û
>W08002398
ABEX01000005
Alphaproteobacteria
Methylorubrum extorquens CM4 [ABEX]
20568
20643
+
Phe
GAA
[ENA]
¡û
>WENV183528747
ONZX01005230
[ONZX] human gut metagenome; human gut
3814
3739
-
Phe
GAA
[ENA]
¡û
>WENV183731436
PJTT01000002
[PJTT] soil metagenome; Soil (2) enriched on wood chips
680259
680334
+
Phe
GAA
[ENA]
¡û
>WENV170018568
BBPD01000013
[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
82299
82374
+
Phe
GAA
[ENA]
¡û
>WENV170019681
BBPE01000046
[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
488
413
-
Phe
GAA
[ENA]
¡û
>W141452337
JFBW01000002
Alphaproteobacteria
Sphingomonas jaspsi DSM 18422 [JFBW]
601831
601756
-
Phe
GAA
[ENA]
¡û
>WENV170991018
MWWA01094167
[MWWA] soil metagenome; MS5-1 sample; Antarctic (ecotone) soil
196
271
+
Phe
GAA
[ENA]
¡û
>WENV170994301
MWWD01065331
[MWWD] soil metagenome; MS2-2 sample; Antarctic (ecotone) soil
169
94
-
Phe
GAA
[ENA]
¡û
>WENV171003189
NNBT01002249
[NNBT] plant metagenome; symbiotic tissue sample KVJ10
23351
23426
+
Phe
GAA
[ENA]
¡û
>C181081596
CP023449
Alphaproteobacteria
Rhizorhabdus dicambivorans Ndbn-20 [CP023449]
1406768
1406843
+
Phe
GAA
-
¡û
>C181175658
CP029173
Alphaproteobacteria
Methylobacterium sp. DM1 [CP029173]
3124390
3124315
-
Phe
GAA
-
¡û
>C191090915
CP032509
Alphaproteobacteria
Georhizobium profundi WS11 [CP032509]
1204564
1204639
+
Phe
GAA
-
¡û
>W09106503
AAVK01000002
Alphaproteobacteria
Rhizorhabdus wittichii RW1 [AAVK]
386322
386397
+
Phe
GAA
[ENA]
¡û
>W141713946
JMUB01000032
Alphaproteobacteria
Rhizorhabdus wittichii DC-6 [JMUB]
348
423
+
Phe
GAA
[ENA]
¡û
>W1911411144
NWUF01000007
Alphaproteobacteria
Rhizorhabdus dicambivorans Ndbn-20m [NWUF]
137453
137378
-
Phe
GAA
[ENA]
¡û
>W1911719025
QQWV01000018
Alphaproteobacteria
Sphingomonas sp. ABOLH S-NIH.Pt17_1112 [QQWV]
2156
2231
+
Phe
GAA
[ENA]
¡û
>W1911719075
QQWW01000006
Alphaproteobacteria
Sphingomonas sp. ABOLG S-NIH.Pt13_0512 [QQWW]
28632
28707
+
Phe
GAA
[ENA]
¡û
>W1911752762
QWLV01000002
Alphaproteobacteria
Sphingomonas sp. ZDH117 [QWLV]
732347
732422
+
Phe
GAA
[ENA]
¡û
>W1911765805
QXDC01000005
Alphaproteobacteria
Hephaestia caeni DSM 25527 [QXDC]
276508
276583
+
Phe
GAA
[ENA]
¡û
>W1911767911
QXFK01000014
Alphaproteobacteria
Altererythrobacter sp. Ery1 [QXFK]
82029
81954
-
Phe
GAA
[ENA]
¡û
>W1911783357
QXTF01000001
Alphaproteobacteria
Sphingomonas sp. DAC4 [QXTF]
1025512
1025587
+
Phe
GAA
[ENA]
¡û
>W1810079080
PEKQ01000378
Alphaproteobacteria
Methylobacterium radiotolerans KUT39 [PEKQ]
541
616
+
Phe
GAA
[ENA]
¡û
>W1810120407
PHSO01000009
Alphaproteobacteria
Tsuneonella flava MS1-4 [PHSO]
26171
26096
-
Phe
GAA
[ENA]
¡û
>SRA1003740
SRR002327.156258
The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
168
243
+
Phe
GAA
[SRA]
>W1810289868
PTFE01000038
Alphaproteobacteria
Bradyrhizobium sp. AC87j1 [PTFE]
5094
5019
-
Phe
GAA
[ENA]
¡û
>W1810390351
PXYJ01000003
Alphaproteobacteria
Allosphingosinicella vermicomposti KCTC 22446 [PXYJ]
129376
129301
-
Phe
GAA
[ENA]
¡û
>W1810395602
PYCN01000004
Alphaproteobacteria
Bradyrhizobium algeriense RST91 [PYCN]
355076
355001
-
Phe
GAA
[ENA]
¡û
>W1810397179
PYDU01000001
Alphaproteobacteria
Methylocystis sp. MitZ-2018 [PYDU]
206718
206643
-
Phe
GAA
[ENA]
¡û
>W1810397224
PYDU01000043
Alphaproteobacteria
Methylocystis sp. MitZ-2018 [PYDU]
17925
17850
-
Phe
GAA
[ENA]
¡û
>W1810605145
QGNA01000004
Alphaproteobacteria
Falsiroseomonas bella CQN31 [QGNA]
302965
303040
+
Phe
GAA
[ENA]
¡û
>W1810624958
QHHQ01000006
Alphaproteobacteria
Acuticoccus sediminis PTG4-2 [QHHQ]
139871
139796
-
Phe
GAA
[ENA]
¡û
>W1810658526
QJJJ01000001
Alphaproteobacteria
Methylobacterium sp. B4 [QJJJ]
707933
708008
+
Phe
GAA
[ENA]
¡û
>W1810672705
QJTP01000004
Alphaproteobacteria
Methylobacterium sp. GV094 [QJTP]
243107
243032
-
Phe
GAA
[ENA]
¡û
>W1810725217
QOCK01000001
Alphaproteobacteria
'Sphingomonas ginsengisoli' Hoang et al. 2012 KCTC 12630 [QOCK]
1147539
1147614
+
Phe
GAA
[ENA]
¡û
>W1810917821
QWDF01000001
Alphaproteobacteria
Sphingomonas mesophila SYSUP0001 [QWDF]
1795055
1795130
+
Phe
GAA
[ENA]
¡û
>SRA1014505
SRR023845.169933
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
168
93
-
Phe
GAA
[SRA]
>SRA1015632
SRR023846.138596
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
167
92
-
Phe
GAA
[SRA]
>SRA1015807
SRR023846.207793
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
167
92
-
Phe
GAA
[SRA]
>SRA1016419
SRR023846.488727
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
167
92
-
Phe
GAA
[SRA]
>C151086713
CP011805
Alphaproteobacteria
Pelagerythrobacter marensis KCTC 22370 [CP011805]
1186906
1186981
+
Phe
GAA
[Ensembl]
¡û
>W2010317626
CACSAS010000001
Alphaproteobacteria
Starkeya sp. HF14-78462 [CACSAS]
200742
200667
-
Phe
GAA
[ENA]
¡û
>W2010370549
CAHJXA010000242
Alphaproteobacteria
Sphingomonas bacterium [CAHJXA]
368
443
+
Phe
GAA
[ENA]
¡û
>W2010526886
JAANYY010000002
Alphaproteobacteria
Sphingopyxis sp. Z10-6 [JAANYY]
1609624
1609549
-
Phe
GAA
[ENA]
¡û
>W2010593119
JABEPR010000003
Alphaproteobacteria
Sphingomonas sp. ID1715 [JABEPR]
1730
1805
+
Phe
GAA
[ENA]
¡û
>W2010635760
JABULH010000002
Alphaproteobacteria
Sphingomonas sp. HHU CXW [JABULH]
102150
102075
-
Phe
GAA
[ENA]
¡û
>W2010699189
JACHEU010000001
Alphaproteobacteria
Aquamicrobium lusatiense DSM 11099 [JACHEU]
962764
962689
-
Phe
GAA
[ENA]
¡û
>W2010700713
JACHGC010000010
Alphaproteobacteria
Pacificimonas flava DSM 107612 [JACHGC]
12233
12308
+
Phe
GAA
[ENA]
¡û
>W2010722914
JACICF010000002
Alphaproteobacteria
Sphingomicrobium lutaoense DSM 24194 [JACICF]
37089
37164
+
Phe
GAA
[ENA]
¡û
>W2010724158
JACIDD010000001
Alphaproteobacteria
Sphingomonas desiccabilis DSM 16792 [JACIDD]
316612
316537
-
Phe
GAA
[ENA]
¡û
>W2010726295
JACIEV010000012
Alphaproteobacteria
Sphingomonas jinjuensis YC6723 [JACIEV]
60140
60215
+
Phe
GAA
[ENA]
¡û
>W2010731878
JACIJK010000005
Alphaproteobacteria
Sphingomonas aerophila DSM 100044 [JACIJK]
144757
144832
+
Phe
GAA
[ENA]
¡û
>W2010740959
JACJIN010000001
Alphaproteobacteria
Methylobacterium sp. RAS18 [JACJIN]
486017
485942
-
Phe
GAA
[ENA]
¡û
>W2011137846
NWUF01000007
Alphaproteobacteria
Rhizorhabdus dicambivorans Ndbn-20m [NWUF]
137453
137378
-
Phe
GAA
[ENA]
¡û
>W2011287015
QQWV01000018
Alphaproteobacteria
Sphingomonas sp. ABOLH S-NIH.Pt17_1112 [QQWV]
2156
2231
+
Phe
GAA
[ENA]
¡û
>W2011287065
QQWW01000006
Alphaproteobacteria
Sphingomonas sp. ABOLG S-NIH.Pt13_0512 [QQWW]
28632
28707
+
Phe
GAA
[ENA]
¡û
>W2011320745
QWLV01000002
Alphaproteobacteria
Sphingomonas sp. ZDH117 [QWLV]
732347
732422
+
Phe
GAA
[ENA]
¡û
>W2011324248
QXDC01000005
Alphaproteobacteria
Hephaestia caeni DSM 25527 [QXDC]
276508
276583
+
Phe
GAA
[ENA]
¡û
>W2011333043
QXTF01000001
Alphaproteobacteria
Sphingomonas sp. DAC4 [QXTF]
1025512
1025587
+
Phe
GAA
[ENA]
¡û
>W2011407752
RCZF01000004
Alphaproteobacteria
Sphingomonas koreensis S11.1Y [RCZF]
310809
310884
+
Phe
GAA
[ENA]
¡û
>W2011408088
RCZN01000001
Alphaproteobacteria
Sphingomonas koreensis S12 [RCZN]
67534
67459
-
Phe
GAA
[ENA]
¡û
>W2011493747
RWJF01000001
Alphaproteobacteria
Sphingomonas sp. HMF7854 [RWJF]
568216
568141
-
Phe
GAA
[ENA]
¡û
>W2011539070
SCNL01000020
Alphaproteobacteria
Sphingomonas sp. 3P27F8 [SCNL]
47081
47156
+
Phe
GAA
[ENA]
¡û
>W2011549761
SDPT01000001
Alphaproteobacteria
Sphingomonas desiccabilis CP1D [SDPT]
316644
316569
-
Phe
GAA
[ENA]
¡û
>W2011692511
SSTI01000003
Alphaproteobacteria
Sphingomonas olei NM83_B4-11 [SSTI]
60940
61015
+
Phe
GAA
[ENA]
¡û
>W2011992672
VDUO01000001
Alphaproteobacteria
Sphingomonas dokdonensis DE0458 [VDUO]
36781
36856
+
Phe
GAA
[ENA]
¡û
>W2012023844
VFSU01000030
Alphaproteobacteria
Sandaracinobacter sp. PAMC 28131 [VFSU]
10371
10296
-
Phe
GAA
[ENA]
¡û
>W2012126865
VRUZ01000011
Alphaproteobacteria
Methylobacterium sp. WL69 [VRUZ]
51
126
+
Phe
GAA
[ENA]
¡û
>W2012439029
WTYK01000003
Alphaproteobacteria
Altererythrobacter soli MCCC 1K02066 [WTYK]
368424
368349
-
Phe
GAA
[ENA]
¡û
>W2110304893
JADCUC010000007
Alphaproteobacteria
Sandaracinobacteroides hominis SZY PN-1 [JADCUC]
4777
4702
-
Phe
GAA
[ENA]
¡û
>W2110330738
JADKYM010000004
Alphaproteobacteria
Sphingopyxis solisilvae R366 [JADKYM]
122931
122856
-
Phe
GAA
[ENA]
¡û
>W2110425609
JAELTW010000001
Alphaproteobacteria
Sphingomonas sp. ASV18 [JAELTW]
19391
19466
+
Phe
GAA
[ENA]
¡û
>W2110427300
JAELXT010000008
Alphaproteobacteria
Microvirga sp. BT325 [JAELXT]
111858
111783
-
Phe
GAA
[ENA]
¡û
>W2110444919
JAERQE010000005
Alphaproteobacteria
Microvirga soli R491 [JAERQE]
108031
107956
-
Phe
GAA
[ENA]
¡û
>W2110462976
JAFBID010000014
Alphaproteobacteria
Microvirga arabica SV2184P [JAFBID]
79920
79845
-
Phe
GAA
[ENA]
¡û
>W2110504580
JAFIWG010000001
Alphaproteobacteria
Methylobacterium sp. OT2 [JAFIWG]
4182963
4182888
-
Phe
GAA
[ENA]
¡û
>W2110569909
JAGSNX010000003
Alphaproteobacteria
Microvirga sp. SRT01 [JAGSNX]
79572
79647
+
Phe
GAA
[ENA]
¡û
>W2110590264
JAHBGB010000006
Alphaproteobacteria
Ancylobacter oerskovii CCM 7435 [JAHBGB]
428067
428142
+
Phe
GAA
[ENA]
¡û
>W2110590447
JAHBGF010000010
Alphaproteobacteria
Ancylobacter sonchi VKM B-3145 [JAHBGF]
419891
419816
-
Phe
GAA
[ENA]
¡û
>W2110591784
JAHCBF010000005
Alphaproteobacteria
Croceicoccus sp. 1NDH52 [JAHCBF]
289519
289594
+
Phe
GAA
[ENA]
¡û
>W2110663404
JAHXZM010000006
Alphaproteobacteria
Sphingomonas sp. RHCKR47 [JAHXZM]
4382
4307
-
Phe
GAA
[ENA]
¡û
>W2110689669
JAINVU010000005
Alphaproteobacteria
Hephaestia sp. CMS5P-6 [JAINVU]
126450
126375
-
Phe
GAA
[ENA]
¡û
>C201203520
CP047608
Alphaproteobacteria
Methylobacterium sp. CLZ [CP047608]
2612788
2612713
-
Phe
GAA
-
¡û
>C211060361
CP043639
Alphaproteobacteria
Sphingomonas sp. NBWT7 [CP043639]
2506204
2506129
-
Phe
GAA
-
¡û
>C211121953
CP059319
Alphaproteobacteria
Sphingomonas wittichii MPO218 [CP059319]
2369188
2369113
-
Phe
GAA
-
¡û
>W2110716490
JAJALI010000017
Alphaproteobacteria
Ancylobacter sp. Lp-2 [JAJALI]
11503
11428
-
Phe
GAA
[ENA]
¡û
>C231252085
CP088247
Alphaproteobacteria
Methylorubrum sp. B1-46 [CP088247]
2838283
2838208
-
Phe
GAA
-
¡û
>C231269686
CP090066
Alphaproteobacteria
Aurantimonas sp. HBX-1 [CP090066]
149924
149849
-
Phe
GAA
-
¡û
>W2110762903
RCVT01000001
Alphaproteobacteria
Sphingomonas sp. MA1305 [RCVT]
136451
136376
-
Phe
GAA
[ENA]
¡û
>C231385308
CP097462
Alphaproteobacteria
Sphingomonas sp. KRR8 [CP097462]
1896428
1896503
+
Phe
GAA
-
¡û
>C231528025
CP110131
Alphaproteobacteria
Methylorubrum extorquens NBC_00036 [CP110131]
4138755
4138830
+
Phe
GAA
-
¡û
>C231589684
CP117025
Alphaproteobacteria
Sphingomonas hankookensis SZ.B2R2 [CP117025]
1021763
1021688
-
Phe
GAA
-
¡û
>C231620020
CP119315
Alphaproteobacteria
Sphingomonas sp. [CP119315]
1354868
1354943
+
Phe
GAA
-
¡û
>C241059006
CP041659
Alphaproteobacteria
Sphingomonas xanthus AE3 [CP041659]
1009200
1009275
+
Phe
GAA
-
¡û
>C241064588
CP042306
Alphaproteobacteria
Sphingomonas panacisoli HKS19 [CP042306]
2554249
2554324
+
Phe
GAA
-
¡û
>C241096692
CP045434
Alphaproteobacteria
Sphingomonas ginsengisoli An et al. 2013 KACC 16858 [CP045434]
2016239
2016314
+
Phe
GAA
-
¡û
>C241126463
CP047895
Alphaproteobacteria
Sphingomonas changnyeongensis C33 [CP047895]
477653
477578
-
Phe
GAA
-
¡û
>C241129913
CP048630
Alphaproteobacteria
Ancylobacter pratisalsi DSM 102029 [CP048630]
2762331
2762406
+
Phe
GAA
-
¡û
>C241133173
CP049107
Alphaproteobacteria
Rhizorhabdus phycosphaerae MK52 [CP049107]
1525968
1525893
-
Phe
GAA
-
¡û
>C241138263
CP049869
Alphaproteobacteria
Sphingomonas piscis HDW15B [CP049869]
1319565
1319490
-
Phe
GAA
-
¡û
>C241138301
CP049870
Alphaproteobacteria
Sphingomonas sp. HDW15A [CP049870]
2033271
2033346
+
Phe
GAA
-
¡û
>C241138359
CP049871
Alphaproteobacteria
Sphingomonas sinipercae HDW15C [CP049871]
411557
411482
-
Phe
GAA
-
¡û
>C241179764
CP059851
Alphaproteobacteria
Sandaracinobacteroides saxicola M6 [CP059851]
3244605
3244530
-
Phe
GAA
-
¡û
>C241181984
CP077638
Alphaproteobacteria
Methylorubrum extorquens PA1 [CP077638]
2948418
2948343
-
Phe
GAA
-
¡û
>C241300926
CP132359
Alphaproteobacteria
Bosea beijingensis REN20 [CP132359]
1188662
1188587
-
Phe
GAA
-
¡û
>C241365949
CP141588
Alphaproteobacteria
Sphingomonas sp. LY54 [CP141588]
2169672
2169597
-
Phe
GAA
-
¡û
>W2310012726
BPQD01000001
Alphaproteobacteria
Methylobacterium adhaesivum DSM 17169 [BPQD]
44678
44753
+
Phe
GAA
[ENA]
¡û
>W1511581106
LARW01000059
Alphaproteobacteria
Sphingomonas sp. SRS2 [LARW]
532
457
-
Phe
GAA
[ENA]
¡û
>W1511587087
LAZX01000092
Alphaproteobacteria
Sphingomonas sp. Ag1 [LAZX]
127883
127808
-
Phe
GAA
[ENA]
¡û
>W121034431
AHKO01000338
Alphaproteobacteria
Rhizorhabdus wittichii DP58 [AHKO]
256
331
+
Phe
GAA
[ENA]
¡û
>W1610724775
LMEJ01000010
Alphaproteobacteria
Sphingomonas sp. Root1294 [LMEJ]
106440
106365
-
Phe
GAA
[ENA]
¡û
>W1610726276
LMFM01000014
Alphaproteobacteria
Sphingomonas sp. Root50 [LMFM]
225898
225973
+
Phe
GAA
[ENA]
¡û
>W1610729537
LMIB01000015
Alphaproteobacteria
Sphingomonas sp. Root710 [LMIB]
143771
143696
-
Phe
GAA
[ENA]
¡û
>W1610729646
LMID01000014
Alphaproteobacteria
Sphingomonas sp. Root720 [LMID]
199241
199316
+
Phe
GAA
[ENA]
¡û
>W1610732117
LMJZ01000010
Alphaproteobacteria
Sphingomonas sp. Leaf5 [LMJZ]
56326
56251
-
Phe
GAA
[ENA]
¡û
>W1610732385
LMKE01000033
Alphaproteobacteria
Sphingomonas sp. Leaf10 [LMKE]
31770
31695
-
Phe
GAA
[ENA]
¡û
>W1610732888
LMKP01000011
Alphaproteobacteria
Sphingomonas sp. Leaf22 [LMKP]
12019
12094
+
Phe
GAA
[ENA]
¡û
>W1610733019
LMKS01000001
Alphaproteobacteria
Sphingomonas sp. Leaf24 [LMKS]
829194
829119
-
Phe
GAA
[ENA]
¡û
>W1610734191
LMLN01000013
Alphaproteobacteria
Sphingomonas sp. Leaf62 [LMLN]
199970
200045
+
Phe
GAA
[ENA]
¡û
>W1610734294
LMLP01000021
Alphaproteobacteria
Sphingomonas sp. Leaf67 [LMLP]
513649
513724
+
Phe
GAA
[ENA]
¡û
>W1610735786
LMMU01000001
Alphaproteobacteria
Methylobacterium sp. Leaf99 [LMMU]
1610442
1610517
+
Phe
GAA
[ENA]
¡û
>W1610857780
LQQO01000061
Alphaproteobacteria
Sphingomonas hankookensis [LQQO]
93997
94072
+
Phe
GAA
[ENA]
¡û
>W1610911730
LSHQ01000002
Alphaproteobacteria
Sphingomonas sp. CCH5-A5 [LSHQ]
742
817
+
Phe
GAA
[ENA]
¡û
>W1610912028
LSHX01000025
Alphaproteobacteria
Sphingomonas sp. CCH21-G11 [LSHX]
729
804
+
Phe
GAA
[ENA]
¡û
>W1610912354
LSIE01000091
Alphaproteobacteria
Sphingomonas sp. CCH16-B10 [LSIE]
4336
4261
-
Phe
GAA
[ENA]
¡û
>W1610912586
LSIJ01000105
Alphaproteobacteria
Sphingomonas sp. CCH10-B3 [LSIJ]
6270
6345
+
Phe
GAA
[ENA]
¡û
>W1610913304
LSJC01000214
Alphaproteobacteria
Sphingomonas sp. CCH20-B6 [LSJC]
5650
5725
+
Phe
GAA
[ENA]
¡û
>W1610913305
LSJC01000214
Alphaproteobacteria
Sphingomonas sp. CCH20-B6 [LSJC]
4341
4266
-
Phe
GAA
[ENA]
¡û
>W1610914430
LSKD01000034
Alphaproteobacteria
Sphingomonas sp. CCH19-C6 [LSKD]
4341
4266
-
Phe
GAA
[ENA]
¡û
>W1610914547
LSKG01000003
Alphaproteobacteria
Sphingomonas sp. CCH15-F11 [LSKG]
3954
3879
-
Phe
GAA
[ENA]
¡û
>W1610914598
LSKH01000073
Alphaproteobacteria
Sphingomonas sp. CCH5-D11 [LSKH]
7876
7801
-
Phe
GAA
[ENA]
¡û
>W1610914667
LSKI01000158
Alphaproteobacteria
Sphingomonas sp. CCH18-H6 [LSKI]
3952
3877
-
Phe
GAA
[ENA]
¡û
>W1610914904
LSKO01001061
Alphaproteobacteria
Sphingomonas sp. CCH15-A1 [LSKO]
3961
3886
-
Phe
GAA
[ENA]
¡û
>W1610914977
LSKP01000094
Alphaproteobacteria
Sphingomonas sp. CCH13-B11 [LSKP]
735
810
+
Phe
GAA
[ENA]
¡û
>W1710083096
BDJB01000007
Alphaproteobacteria
Sphingomonas sp. TZW2008 [BDJB]
103316
103241
-
Phe
GAA
[ENA]
¡û
>W1710515676
FNBZ01000001
Alphaproteobacteria
Bosea robiniae [FNBZ]
487566
487641
+
Phe
GAA
[ENA]
¡û
>W1710539421
FNVI01000024
Alphaproteobacteria
Methylobacterium sp. 190mf [FNVI]
44151
44076
-
Phe
GAA
[ENA]
¡û
>W1710542338
FNZB01000002
Alphaproteobacteria
Sphingomonas sp. OV641 [FNZB]
241637
241712
+
Phe
GAA
[ENA]
¡û
>W1710543458
FNZZ01000002
Alphaproteobacteria
Sphingomonas palmae JS21-1 [FNZZ]
591567
591642
+
Phe
GAA
[ENA]
¡û
>W1710546454
FOCF01000006
Alphaproteobacteria
Sphingomonas gellani S6-262 [FOCF]
245339
245414
+
Phe
GAA
[ENA]
¡û
>W1710547173
FOCS01000003
Alphaproteobacteria
Methylobacterium sp. UNC300MFChir4.1 [FOCS]
20936
21011
+
Phe
GAA
[ENA]
¡û
>W1710563192
FOPM01000017
Alphaproteobacteria
Methylobacterium gossipiicola [FOPM]
68349
68424
+
Phe
GAA
[ENA]
¡û
>W1710573604
FOXP01000005
Alphaproteobacteria
Sphingomonas rubra [FOXP]
207008
207083
+
Phe
GAA
[ENA]
¡û
>W1710709969
LDRP01000133
Alphaproteobacteria
Methylobacterium radiotolerans [LDRP]
4667
4592
-
Phe
GAA
[ENA]
¡û
>W1710743457
LGVA01000004
Alphaproteobacteria
Sphingomonas sp. Ndbn-20 [LGVA]
137379
137304
-
Phe
GAA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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