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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.341939 (4 seq.)
>W1910703295
MEZW01000020
Unclassified
Candidatus Berkelbacteria bacterium RIFCSPHIGHO2_12_FULL_50_11 [MEZW]
39968
39895
-
Pro
GGG
[ENA]
¡û
>W1910703334
MEZX01000002
Unclassified
Candidatus Berkelbacteria bacterium RIFCSPLOWO2_01_FULL_50_28 [MEZX]
417506
417433
-
Pro
GGG
[ENA]
¡û
>W2010836721
MEZW01000020
Unclassified
Candidatus Berkelbacteria bacterium RIFCSPHIGHO2_12_FULL_50_11 [MEZW]
39968
39895
-
Pro
GGG
[ENA]
¡û
>W2010836760
MEZX01000002
Unclassified
Candidatus Berkelbacteria bacterium RIFCSPLOWO2_01_FULL_50_28 [MEZX]
417506
417433
-
Pro
GGG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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