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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.342206 (173 seq.)
>W131195475
ASSQ01000015
Bacteroidota
Parabacteroides goldsteinii dnLKV18 [ASSQ]
239746
239820
+
Glu
TTC
[ENA]
¡û
>W131195476
ASSQ01000015
Bacteroidota
Parabacteroides goldsteinii dnLKV18 [ASSQ]
240123
240195
+
Glu
TTC
[ENA]
¡û
>W131220388
ATZI01000001
Bacteroidota
Bacteroides graminisolvens DSM 19988 [ATZI]
395350
395276
-
Glu
TTC
[ENA]
¡û
>WENV180003426
FLNZ01004400
[FLNZ] bioreactor metagenome; Moose rumen
21428
21356
-
Glu
TTC
[ENA]
¢þ
>WENV180007613
FLSA01119481
[FLSA] metagenome; saliva
183
255
+
Glu
TTC
[ENA]
¢þ
>WENV180094797
MTBK01031082
[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
791
719
-
Glu
TTC
[ENA]
¢þ
>WENV180541915
OCHS01032633
[OCHS] human gut metagenome; human gut
645
573
-
Glu
TTC
[ENA]
¢þ
>WENV180743833
ODHJ01000034
[ODHJ] human metagenome; G_DNA_Stool
90154
90226
+
Glu
TTC
[ENA]
¢þ
>W141074433
ASYL01000056
Bacteroidota
Porphyromonas gingivalis SJD2 [ASYL]
293
365
+
Glu
TTC
[ENA]
¡û
>W141074434
ASYL01000056
Bacteroidota
Porphyromonas gingivalis SJD2 [ASYL]
713
785
+
Glu
TTC
[ENA]
¡û
>WENV180826418
ODJZ01002510
[ODJZ] human metagenome; G_DNA_Stool
4463
4535
+
Glu
TTC
[ENA]
¢þ
>WENV180830581
ODKB01006281
[ODKB] human metagenome; G_DNA_Tongue dorsum
1075
1003
-
Glu
TTC
[ENA]
¢þ
>WENV180956211
ODUK01000668
[ODUK] human metagenome; G_DNA_Stool
18613
18685
+
Glu
TTC
[ENA]
¢þ
>WENV181005940
ODWA01000226
[ODWA] human metagenome; G_DNA_Buccal mucosa
8426
8354
-
Glu
TTC
[ENA]
¢þ
>WENV181005941
ODWA01000226
[ODWA] human metagenome; G_DNA_Buccal mucosa
8021
7949
-
Glu
TTC
[ENA]
¢þ
>WENV181027969
ODXD01161739
[ODXD] human metagenome; G_DNA_Buccal mucosa
133
205
+
Glu
TTC
[ENA]
¢þ
>WENV181117076
OEFH01000103
[OEFH] human metagenome; G_DNA_Stool
71674
71602
-
Glu
TTC
[ENA]
¢þ
>WENV181118383
OEFH01010685
[OEFH] human metagenome; G_DNA_Stool
1680
1752
+
Glu
TTC
[ENA]
¢þ
>WENV181197724
OERC01000014
[OERC] metagenome; Caecal content
82371
82299
-
Glu
TTC
[ENA]
¢þ
>WENV181250537
OFFN01020352
[OFFN] mouse gut metagenome; faeces
651
723
+
Glu
TTC
[ENA]
¢þ
>WENV181258902
OFFV01005231
[OFFV] mouse gut metagenome; faeces
2892
2820
-
Glu
TTC
[ENA]
¢þ
>WENV181259098
OFFV01019476
[OFFV] mouse gut metagenome; faeces
410
338
-
Glu
TTC
[ENA]
¢þ
>WENV181276726
OFGK01026388
[OFGK] mouse gut metagenome; faeces
830
758
-
Glu
TTC
[ENA]
¢þ
>WENV181283376
OFGQ01002794
[OFGQ] mouse gut metagenome; faeces
6723
6795
+
Glu
TTC
[ENA]
¢þ
>WENV181283743
OFGQ01017119
[OFGQ] mouse gut metagenome; faeces
625
553
-
Glu
TTC
[ENA]
¢þ
>WENV181336272
OFMD01000219
[OFMD] human gut metagenome; human gut
23928
24000
+
Glu
TTC
[ENA]
¢þ
>WENV181430955
OGDA01002003
[OGDA] metagenome; Human gut stool
977
1049
+
Glu
TTC
[ENA]
¢þ
>WENV181466948
OGER01000200
[OGER] metagenome; Human gut stool
11647
11575
-
Glu
TTC
[ENA]
¢þ
>WENV181486203
OGFN01000122
[OGFN] metagenome; Human gut stool
30640
30712
+
Glu
TTC
[ENA]
¢þ
>WENV181515203
OGGW01001103
[OGGW] metagenome; Human gut stool
11253
11181
-
Glu
TTC
[ENA]
¢þ
>WENV181515575
OGGW01006738
[OGGW] metagenome; Human gut stool
403
477
+
Glu
TTC
[ENA]
¢þ
>WENV181516000
OGGX01000083
[OGGX] metagenome; Human gut stool
33886
33814
-
Glu
TTC
[ENA]
¢þ
>WENV181517988
OGHA01000364
[OGHA] metagenome; Human gut stool
22463
22391
-
Glu
TTC
[ENA]
¢þ
>WENV181528661
OGHL01001687
[OGHL] metagenome; Human gut stool
11102
11174
+
Glu
TTC
[ENA]
¢þ
>WENV181528703
OGHL01002341
[OGHL] metagenome; Human gut stool
8198
8270
+
Glu
TTC
[ENA]
¢þ
>WENV181532857
OGHQ01005018
[OGHQ] metagenome; Human gut stool
1132
1204
+
Glu
TTC
[ENA]
¢þ
>WENV181538009
OGHY01000218
[OGHY] metagenome; Human gut stool
31856
31928
+
Glu
TTC
[ENA]
¢þ
>WENV181603627
OGLI01000517
[OGLI] metagenome; Human gut stool
20970
20898
-
Glu
TTC
[ENA]
¢þ
>WENV181617594
OGMB01000182
[OGMB] metagenome; Human gut stool
23602
23674
+
Glu
TTC
[ENA]
¢þ
>WENV181619459
OGME01000008
[OGME] metagenome; Human gut stool
109163
109091
-
Glu
TTC
[ENA]
¢þ
>WENV181629061
OGMP01000012
[OGMP] metagenome; Human gut stool
73100
73172
+
Glu
TTC
[ENA]
¢þ
>WENV181632894
OGMU01000607
[OGMU] metagenome; Human gut stool
637
565
-
Glu
TTC
[ENA]
¢þ
>WENV181650542
OGNU01005717
[OGNU] metagenome; Human gut stool
866
938
+
Glu
TTC
[ENA]
¢þ
>WENV181653003
OGNY01000469
[OGNY] metagenome; Human gut stool
24308
24236
-
Glu
TTC
[ENA]
¢þ
>WENV181731538
OGQD01001310
[OGQD] human gut metagenome; faeces
14651
14579
-
Glu
TTC
[ENA]
¢þ
>WENV181732246
OGQD01018848
[OGQD] human gut metagenome; faeces
786
860
+
Glu
TTC
[ENA]
¢þ
>WENV181746024
OGQN01000155
[OGQN] human gut metagenome; faeces
40410
40482
+
Glu
TTC
[ENA]
¢þ
>WENV181746957
OGQN01006926
[OGQN] human gut metagenome; faeces
2319
2247
-
Glu
TTC
[ENA]
¢þ
>WENV181788430
OGRO01001274
[OGRO] human gut metagenome; faeces
11845
11917
+
Glu
TTC
[ENA]
¢þ
>WENV181802692
OGSD01001298
[OGSD] human gut metagenome; faeces
9427
9355
-
Glu
TTC
[ENA]
¢þ
>WENV181802738
OGSD01001601
[OGSD] human gut metagenome; faeces
12982
13054
+
Glu
TTC
[ENA]
¢þ
>WENV181803603
OGSD01026815
[OGSD] human gut metagenome; faeces
506
578
+
Glu
TTC
[ENA]
¢þ
>WENV181863660
OGWT01006984
[OGWT] human gut metagenome; faeces
564
636
+
Glu
TTC
[ENA]
¢þ
>WENV181960093
OGZN01014128
[OGZN] human gut metagenome; faeces
1634
1706
+
Glu
TTC
[ENA]
¢þ
>WENV182006203
OHBF01000087
[OHBF] human gut metagenome; feces
62408
62336
-
Glu
TTC
[ENA]
¢þ
>WENV182021906
OHCC01001192
[OHCC] human gut metagenome; feces
9222
9150
-
Glu
TTC
[ENA]
¢þ
>WENV182022091
OHCC01008381
[OHCC] human gut metagenome; feces
74
2
-
Glu
TTC
[ENA]
¢þ
>WENV182043153
OHDP01001270
[OHDP] human gut metagenome; feces
560
632
+
Glu
TTC
[ENA]
¢þ
>WENV182044060
OHDR01000545
[OHDR] human gut metagenome; feces
2438
2366
-
Glu
TTC
[ENA]
¢þ
>WENV182046210
OHDV01000114
[OHDV] human gut metagenome; feces
29065
28993
-
Glu
TTC
[ENA]
¢þ
>WENV182051770
OHEG01007917
[OHEG] human gut metagenome; feces
1917
1845
-
Glu
TTC
[ENA]
¢þ
>WENV182065921
OHFB01000388
[OHFB] human gut metagenome; feces
11498
11426
-
Glu
TTC
[ENA]
¢þ
>WENV182077900
OHFY01000054
[OHFY] human gut metagenome; feces
24912
24840
-
Glu
TTC
[ENA]
¢þ
>WENV182083140
OHGN01009586
[OHGN] human gut metagenome; feces
547
619
+
Glu
TTC
[ENA]
¢þ
>WENV182086874
OHGU01019915
[OHGU] human gut metagenome; feces
842
770
-
Glu
TTC
[ENA]
¢þ
>WENV182108585
OHIM01000098
[OHIM] human gut metagenome; feces
50490
50418
-
Glu
TTC
[ENA]
¢þ
>WENV182126829
OHJU01000980
[OHJU] human gut metagenome; feces
4692
4620
-
Glu
TTC
[ENA]
¢þ
>WENV182148051
OHLE01005235
[OHLE] human gut metagenome; feces
977
1049
+
Glu
TTC
[ENA]
¢þ
>WENV182180489
OHNO01001428
[OHNO] human gut metagenome; feces
3981
4053
+
Glu
TTC
[ENA]
¢þ
>WENV182203170
OHPP01001481
[OHPP] human gut metagenome; feces
6949
7021
+
Glu
TTC
[ENA]
¢þ
>WENV182203636
OHPP01043738
[OHPP] human gut metagenome; feces
228
300
+
Glu
TTC
[ENA]
¢þ
>WENV182210738
OHQE01000752
[OHQE] human gut metagenome; feces
11478
11406
-
Glu
TTC
[ENA]
¢þ
>WENV182228058
OHRH01000038
[OHRH] human gut metagenome; feces
90223
90295
+
Glu
TTC
[ENA]
¢þ
>WENV182260178
OHTJ01000125
[OHTJ] human gut metagenome; feces
27294
27222
-
Glu
TTC
[ENA]
¢þ
>WENV182273346
OHUJ01000143
[OHUJ] human gut metagenome; feces
37148
37220
+
Glu
TTC
[ENA]
¢þ
>WENV182273850
OHUJ01008648
[OHUJ] human gut metagenome; feces
906
978
+
Glu
TTC
[ENA]
¢þ
>WENV182283623
OHVK01000452
[OHVK] human gut metagenome; feces
5861
5933
+
Glu
TTC
[ENA]
¢þ
>WENV182301642
OHWR01015061
[OHWR] human gut metagenome; feces
281
209
-
Glu
TTC
[ENA]
¢þ
>WENV182310357
OHXM01000450
[OHXM] human gut metagenome; feces
9656
9584
-
Glu
TTC
[ENA]
¢þ
>WENV182311027
OHXQ01000419
[OHXQ] human gut metagenome; feces
2363
2435
+
Glu
TTC
[ENA]
¢þ
>WENV182312412
OHXW01004212
[OHXW] human gut metagenome; feces
1564
1492
-
Glu
TTC
[ENA]
¢þ
>WENV182316852
OHYE01000015
[OHYE] human gut metagenome; feces
17367
17439
+
Glu
TTC
[ENA]
¢þ
>WENV182318851
OHYG01000101
[OHYG] human gut metagenome; feces
15106
15178
+
Glu
TTC
[ENA]
¢þ
>WENV182353072
OIBL01000252
[OIBL] human gut metagenome; feces
5162
5234
+
Glu
TTC
[ENA]
¢þ
>WENV182353482
OIBL01006141
[OIBL] human gut metagenome; feces
1695
1623
-
Glu
TTC
[ENA]
¢þ
>WENV182354633
OIBN01036178
[OIBN] human gut metagenome; feces
51
123
+
Glu
TTC
[ENA]
¢þ
>WENV182358796
OIBW01004364
[OIBW] human gut metagenome; feces
2733
2661
-
Glu
TTC
[ENA]
¢þ
>WENV182387628
OIEA01008110
[OIEA] human gut metagenome; feces
1191
1119
-
Glu
TTC
[ENA]
¢þ
>WENV182419610
OIGK01007251
[OIGK] human gut metagenome; human gut
1035
963
-
Glu
TTC
[ENA]
¢þ
>WENV182432692
OIIP01000426
[OIIP] human gut metagenome; human gut
7
79
+
Glu
TTC
[ENA]
¢þ
>WENV182440691
OIKA01002293
[OIKA] human gut metagenome; human gut
1632
1704
+
Glu
TTC
[ENA]
¢þ
>WENV182449825
OILT01000430
[OILT] human gut metagenome; human gut
2540
2612
+
Glu
TTC
[ENA]
¢þ
>WENV182462386
OINY01000612
[OINY] human gut metagenome; human gut
4319
4247
-
Glu
TTC
[ENA]
¢þ
>WENV182464932
OIOL01000789
[OIOL] human gut metagenome; human gut
91
19
-
Glu
TTC
[ENA]
¢þ
>WENV182473293
OIPS01003138
[OIPS] human gut metagenome; human gut
284
356
+
Glu
TTC
[ENA]
¢þ
>WENV182487488
OIRW01001439
[OIRW] human gut metagenome; human gut
517
589
+
Glu
TTC
[ENA]
¢þ
>WENV182504483
OIUU01001924
[OIUU] human gut metagenome; human gut
427
355
-
Glu
TTC
[ENA]
¢þ
>WENV182713186
OJPG01000040
[OJPG] human gut metagenome; stool sample
107518
107446
-
Glu
TTC
[ENA]
¢þ
>WENV182713202
OJPG01000052
[OJPG] human gut metagenome; stool sample
24911
24839
-
Glu
TTC
[ENA]
¢þ
>WENV182716145
OJPJ01000597
[OJPJ] human gut metagenome; stool sample
1883
1955
+
Glu
TTC
[ENA]
¢þ
>WENV182743419
OJQQ01000447
[OJQQ] human gut metagenome; stool sample
2522
2594
+
Glu
TTC
[ENA]
¢þ
>WENV182757929
OJRI01000026
[OJRI] human gut metagenome; stool sample
85693
85765
+
Glu
TTC
[ENA]
¢þ
>WENV182773244
OJRZ01000175
[OJRZ] human gut metagenome; human gut
11823
11895
+
Glu
TTC
[ENA]
¢þ
>WENV182773271
OJRZ01000209
[OJRZ] human gut metagenome; human gut
43910
43982
+
Glu
TTC
[ENA]
¢þ
>WENV182774312
OJSA01000024
[OJSA] human gut metagenome; human gut
42027
42099
+
Glu
TTC
[ENA]
¢þ
>WENV182774764
OJSA01001092
[OJSA] human gut metagenome; human gut
14886
14814
-
Glu
TTC
[ENA]
¢þ
>WENV182780931
OJSE01001024
[OJSE] human gut metagenome; human gut
28690
28762
+
Glu
TTC
[ENA]
¢þ
>WENV182781491
OJSE01004814
[OJSE] human gut metagenome; human gut
607
679
+
Glu
TTC
[ENA]
¢þ
>WENV182868749
OKRS01022238
[OKRS] human gut metagenome; faeces
479
405
-
Glu
TTC
[ENA]
¢þ
>WENV182898893
OKSS01000526
[OKSS] human gut metagenome; feces
9912
9840
-
Glu
TTC
[ENA]
¢þ
>WENV182900010
OKST01004967
[OKST] human gut metagenome; feces
562
634
+
Glu
TTC
[ENA]
¢þ
>WENV182901113
OKSV01000094
[OKSV] human gut metagenome; feces
53253
53325
+
Glu
TTC
[ENA]
¢þ
>WENV182912496
OKTM01001175
[OKTM] human gut metagenome; feces
6062
5990
-
Glu
TTC
[ENA]
¢þ
>WENV182979561
OKYM01013287
[OKYM] human gut metagenome; human gut
891
819
-
Glu
TTC
[ENA]
¢þ
>WENV182981798
OKYY01004562
[OKYY] human gut metagenome; human gut
193
121
-
Glu
TTC
[ENA]
¢þ
>WENV182984856
OKZN01000969
[OKZN] human gut metagenome; human gut
3860
3932
+
Glu
TTC
[ENA]
¢þ
>WENV182997168
OLBO01024629
[OLBO] human gut metagenome; human gut
4
76
+
Glu
TTC
[ENA]
¢þ
>WENV182999874
OLCB01001891
[OLCB] human gut metagenome; human gut
354
426
+
Glu
TTC
[ENA]
¢þ
>WENV183006673
OLDF01002763
[OLDF] human gut metagenome; human gut
1499
1571
+
Glu
TTC
[ENA]
¢þ
>WENV183019135
OLFB01000776
[OLFB] human gut metagenome; human gut
631
703
+
Glu
TTC
[ENA]
¢þ
>WENV183068575
OLIQ01014584
[OLIQ] metagenome; faeces
379
307
-
Glu
TTC
[ENA]
¢þ
>WENV183221678
OLQL01016782
[OLQL] human gut metagenome; faeces
1969
1897
-
Glu
TTC
[ENA]
¢þ
>WENV183236935
OLQX01038829
[OLQX] human gut metagenome; faeces
670
742
+
Glu
TTC
[ENA]
¢þ
>WENV183294113
OLSK01005845
[OLSK] human gut metagenome; faeces
3297
3369
+
Glu
TTC
[ENA]
¢þ
>WENV183294502
OLSK01025512
[OLSK] human gut metagenome; faeces
371
443
+
Glu
TTC
[ENA]
¢þ
>WENV183323669
OLVY01000378
[OLVY] human gut metagenome; feces
1842
1915
+
Glu
TTC
[ENA]
¢þ
>WENV183347115
OLWT01001569
[OLWT] human gut metagenome; feces
7968
8040
+
Glu
TTC
[ENA]
¢þ
>WENV183352219
OLWZ01007728
[OLWZ] human gut metagenome; feces
2108
2180
+
Glu
TTC
[ENA]
¢þ
>WENV183383006
OLYL01046928
[OLYL] human gut metagenome; feces
401
329
-
Glu
TTC
[ENA]
¢þ
>WENV183386863
OLYV01006434
[OLYV] human gut metagenome; feces
1005
933
-
Glu
TTC
[ENA]
¢þ
>WENV183399323
OLZQ01002314
[OLZQ] human gut metagenome; feces
2185
2257
+
Glu
TTC
[ENA]
¢þ
>WENV183484501
OMFP01000018
[OMFP] human gut metagenome; feces
85886
85958
+
Glu
TTC
[ENA]
¢þ
>WENV183484840
OMFP01001976
[OMFP] human gut metagenome; feces
372
446
+
Glu
TTC
[ENA]
¢þ
>WENV183492071
OMGH01001837
[OMGH] human gut metagenome; human gut
9688
9616
-
Glu
TTC
[ENA]
¢þ
>WENV183519797
OMNT01002230
[OMNT] human gut metagenome; faeces
12008
11936
-
Glu
TTC
[ENA]
¢þ
>WENV183519922
OMNT01003227
[OMNT] human gut metagenome; faeces
558
630
+
Glu
TTC
[ENA]
¢þ
>WENV183520995
OMNU01000206
[OMNU] human gut metagenome; feces
8075
8003
-
Glu
TTC
[ENA]
¢þ
>WENV183523070
ONZS01000023
[ONZS] human gut metagenome; human gut
48054
48126
+
Glu
TTC
[ENA]
¢þ
>WENV183535123
OOAF01002546
[OOAF] human gut metagenome; human gut
1075
1003
-
Glu
TTC
[ENA]
¢þ
>WENV183599501
OODH01001121
[OODH] human gut metagenome; human gut
559
631
+
Glu
TTC
[ENA]
¢þ
>WENV183603953
OODL01000607
[OODL] human gut metagenome; human gut
2
74
+
Glu
TTC
[ENA]
¢þ
>WENV183644682
OQVP01046131
[OQVP] human gut metagenome; human gut
628
555
-
Glu
TTC
[ENA]
¢þ
>WENV183771709
PPYF01000044
[PPYF] human gut metagenome; stool from patient with Crohn's disease
10161
10089
-
Glu
TTC
[ENA]
¢þ
>WENV183773470
PPYF01026886
[PPYF] human gut metagenome; stool from patient with Crohn's disease
33184
33256
+
Glu
TTC
[ENA]
¢þ
>WENV183773656
PPYF01027244
[PPYF] human gut metagenome; stool from patient with Crohn's disease
24074
24002
-
Glu
TTC
[ENA]
¢þ
>WENV183773697
PPYF01027363
[PPYF] human gut metagenome; stool from patient with Crohn's disease
23514
23588
+
Glu
TTC
[ENA]
¢þ
>WENV183773698
PPYF01027363
[PPYF] human gut metagenome; stool from patient with Crohn's disease
23898
23972
+
Glu
TTC
[ENA]
¢þ
>WENV183775160
PPYF01064932
[PPYF] human gut metagenome; stool from patient with Crohn's disease
15664
15592
-
Glu
TTC
[ENA]
¢þ
>WENV183778793
PPYF01129301
[PPYF] human gut metagenome; stool from patient with Crohn's disease
61525
61453
-
Glu
TTC
[ENA]
¢þ
>WENV183786156
PPYF01303631
[PPYF] human gut metagenome; stool from patient with Crohn's disease
61448
61376
-
Glu
TTC
[ENA]
¢þ
>WENV183786811
PPYF01307358
[PPYF] human gut metagenome; stool from patient with Crohn's disease
214
286
+
Glu
TTC
[ENA]
¢þ
>WENV183786812
PPYF01307358
[PPYF] human gut metagenome; stool from patient with Crohn's disease
591
663
+
Glu
TTC
[ENA]
¢þ
>WENV183789806
PPYF01388689
[PPYF] human gut metagenome; stool from patient with Crohn's disease
3465
3393
-
Glu
TTC
[ENA]
¢þ
>WENV170689923
LFRM01318048
[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
1577
1651
+
Glu
TTC
[ENA]
¢þ
>WENV170717722
LSQX01047260
[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
9305
9379
+
Glu
TTC
[ENA]
¢þ
>WENV170719554
LSQX01118156
[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
663
737
+
Glu
TTC
[ENA]
¢þ
>WENV170726297
LSQX01374732
[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
4131
4057
-
Glu
TTC
[ENA]
¢þ
>WENV170970125
MTKW01053603
[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
3421
3495
+
Glu
TTC
[ENA]
¢þ
>C181123617
CP025930
Bacteroidota
Porphyromonas gingivalis ATCC 33277 [CP025930]
425988
425916
-
Glu
TTC
-
¡û
>C181123618
CP025930
Bacteroidota
Porphyromonas gingivalis ATCC 33277 [CP025930]
425568
425496
-
Glu
TTC
-
¡û
>C181123690
CP025932
Bacteroidota
Porphyromonas gingivalis W83 [CP025932]
1813107
1813179
+
Glu
TTC
-
¡û
>C181123691
CP025932
Bacteroidota
Porphyromonas gingivalis W83 [CP025932]
1813527
1813599
+
Glu
TTC
-
¡û
>W1910371094
FUFD01000016
Bacteroidota
Porphyromonas gingivalis 7BTORR [FUFD]
16756
16828
+
Glu
TTC
[ENA]
¡û
>W1910371095
FUFD01000016
Bacteroidota
Porphyromonas gingivalis 7BTORR [FUFD]
17176
17248
+
Glu
TTC
[ENA]
¡û
>C151101592
HG934468
Bacteroidota
Mucinivorans hirudinis [HG934468]
711510
711582
+
Glu
TTC
[Ensembl]
¡û
>C151101622
HG934468
Bacteroidota
Mucinivorans hirudinis [HG934468]
1010338
1010264
-
Glu
TTC
[Ensembl]
¡û
>W1511336098
JQZX01000012
Bacteroidota
Porphyromonas canoris COT-108 OH1224 [JQZX]
159724
159650
-
Glu
TTC
[ENA]
¡û
>W1511336099
JQZX01000012
Bacteroidota
Porphyromonas canoris COT-108 OH1224 [JQZX]
159328
159256
-
Glu
TTC
[ENA]
¡û
>W1511336366
JRAE01000067
Bacteroidota
Porphyromonas gulae COT-052_OH2199 [JRAE]
50991
50919
-
Glu
TTC
[ENA]
¡û
>W1511336367
JRAE01000067
Bacteroidota
Porphyromonas gulae COT-052_OH2199 [JRAE]
50572
50500
-
Glu
TTC
[ENA]
¡û
>W1511336805
JRAP01000012
Bacteroidota
Porphyromonas sp. COT-108 OH2963 [JRAP]
105059
105133
+
Glu
TTC
[ENA]
¡û
>W1511336806
JRAP01000012
Bacteroidota
Porphyromonas sp. COT-108 OH2963 [JRAP]
105455
105527
+
Glu
TTC
[ENA]
¡û
>W1710017885
ASYM01000071
Bacteroidota
Porphyromonas gingivalis SJD4 [ASYM]
20051
19979
-
Glu
TTC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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